Varunaivibrio sulfuroxidans: P3M64_07995
Help
Entry
P3M64_07995 CDS
T08892
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3M64_07995 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_07995 (mutM)
Enzymes [BR:
vsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
P3M64_07995 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P3M64_07995 (mutM)
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P3M64_07995 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WES29594
LinkDB
All DBs
Position
complement(1694089..1694937)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRCGLVSSLEGRVLRRVTVRRAGLRKPFPNDFAARLTDARVIAVRRRAKYL
LVDLSSDETLIWHLGMSGQVRIEGEADVKTPLGAHDHVVFETDRGVRVVFRDPRRFGLMA
LCATADVDRHPLLEKLGPEPTDRAFDGAFLAARLRGRKTSIKAALMDQSIIAGLGNIYVC
ESLYRAGLSPRRSAHTVQGGRATRLADAVRAVIAEAIAAGGSSLRDHRQTNGELGYFQHR
FAVYGRVGERCPDCTCTPSHTGGIRRIVQNGRSTFYCATRQR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacccgaagtcgaaaccgttcgttgtggccttgtttcgtcccttgaagga
cgggttttgcgccgcgttaccgtgcgccgcgccggattgcgcaagccttttcccaacgat
ttcgccgctcgcctcacggacgcgcgggtgatcgcggttcgccgccgtgcgaaatacttg
ctggtcgatctttcgagcgacgaaacgctgatctggcatctcggtatgtcgggtcaggtg
cgtatcgaaggtgaagccgatgtcaagacccccttgggcgcgcacgaccatgtcgttttc
gagaccgaccggggcgttcgcgtggtgtttcgcgatccgcgccgattcggcctgatggcg
ctgtgcgccaccgccgatgtggatcgccatcctctgctggagaagttgggtcccgaacct
accgatcgggcgttcgatggcgcgtttctagcggcgcgcctgagggggcggaaaacttcg
atcaaggcggcgctgatggatcagtcgatcatcgccggtttggggaacatttatgtgtgc
gagagcctttatcgcgcagggctgtcgccgcgccgttcggcccatacggtacagggcggg
cgggcgacgcgtctggccgacgcggtgcgcgcggtgatcgccgaggcgatcgccgccggc
ggctcgtcgttgcgcgatcaccgccagaccaacggggaactgggctatttccagcaccgt
ttcgccgtttacgggcgggtgggcgaacgctgtcccgattgtacatgcaccccctcgcat
acgggcggcattcggcgtattgttcaaaacggtcgttcgacattttactgtgccacccgg
caacgctag
DBGET
integrated database retrieval system
