Varunaivibrio sulfuroxidans: P3M64_08060
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Entry
P3M64_08060 CDS
T08892
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vsu03110
]
P3M64_08060 (clpB)
Chaperones and folding catalysts [BR:
vsu03110
]
Heat shock proteins
HSP100
P3M64_08060 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_7
IstB_IS21
TniB
bpMoxR
AAA_25
AAA_3
NACHT
T2SSE
AAA_24
NBD_SMAX1
DNA_pol3_delta2
Terminase_6
Motif
Other DBs
NCBI-ProteinID:
WES29607
LinkDB
All DBs
Position
complement(1709319..1711910)
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AA seq
863 aa
AA seq
DB search
MDFEKYTERSRGFIQSAQTMAQRAGHQQLTPVHLLKVLLDDDEGLCAKLIDAAGGQSKKA
LKAVEAALAKMPTVEGGGAGQVYLAQETARLFEQAEKVAQKAGDSYVTVERLLLAMVLAQ
GTQVGNILKDAGLDPQGLNRAIEDIRKGRKADSASAEDQYDALKKYARDLTAAAAEGKID
PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAMRIVQGDVPENLKNKTLM
VLDLGALVAGAKYRGEFEERLKAVLGEVTAAAGEIVLFIDEMHTLVGAGASEGSMDASNL
IKPALARGELHCVGATTLNEYRKYVEKDAALARRFQPVFVSEPSVEDTISILRGIKEKYE
LHHGVRISDGALVSAATLSNRYIQDRFLPDKAIDLMDEASSRLRMEVDSKPEALDELDRR
IIQLKIEREAIKKEKDDASRARLKTLNEELEGLEGRSAAMTEEWTSEKSALADATKIKEE
LDRTRIELDKAMREGRYEKVGELQYDAIPMLEKKLAESEQRGEGHILEEAVMPEHIASVV
SRWTGIPVDKMLQGEREKLLGMEDNLRRRVVGQNEALVAVSNAVRRARAGLQDANRPIGS
FLFLGPTGVGKTELTKALAEFLFDDETAMVRIDMSEYMEKHAVARLIGAPPGYVGYEEGG
GLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTMIVMTSNL
GGEILANQEEGRDSGEVRSQVMDIVRRAFRPEFLNRLDEVILFHRLFRENMNAIVDIQLG
HLRDLLAERKMTLELSPDAVNWLADKGYDPMYGARPLKRVIQSALQNALAGMILEGKIAD
GDAIRVDVDGGGLSVNGEHLRAA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaatacaccgaacgctcgcggggttttatccaatcggcgcagacgatg
gcgcagcgcgcgggccatcagcaattgacgcccgtgcacctgctgaaggtgcttctcgat
gatgacgaggggttatgcgccaagttgatcgacgccgccggcgggcagtcgaaaaaggcc
ctgaaggcggtcgaggcggcattggccaagatgcccaccgtcgaaggcggtggggcgggg
caggtgtacctcgcccaggaaacggcgcgcctgttcgagcaggccgaaaaagtcgcgcaa
aaagccggtgacagctacgtcaccgtggagcgccttttgctggcgatggtcctcgcccag
gggacgcaagtcggcaacatcctgaaggacgccggtctcgacccgcaaggcctgaaccgg
gcgatcgaagacatccgcaaggggcgcaaggccgacagcgcctcggccgaggaccagtac
gacgccctcaagaaatacgcccgcgacctgacggcggcggcggcggaaggcaaaatcgat
ccggtgatcggtcgtgacgaggagattcgccgcaccatccaggtgttgtcgcggcgcacc
aagaacaacccggtcctgatcggcgagcccggcgttggcaagaccgccatcgtcgaaggg
ctggcgatgcgcatcgtccaaggcgacgtgccggaaaacctgaaaaacaaaaccctgatg
gtgctcgacctgggcgccctggtcgccggggccaaataccgcggcgagttcgaggagcgc
ctgaaggccgtcctcggcgaagtcaccgcggcggcgggcgagatcgtcctgtttatcgac
gagatgcacaccctggtcggcgccggggcgagcgaggggtcgatggacgcctccaacctg
atcaagcccgccctggcgcgcggcgaactgcattgcgtcggcgccacgacattgaacgaa
tatcgcaaatatgtcgagaaagacgccgccctggcgcgccgcttccagccggtgttcgtc
agcgagcccagcgtcgaggacaccatttccattttgcgtgggatcaaggaaaaatacgaa
ctgcatcacggcgtcaggatctccgacggcgccctggtgtcggcggcgaccctgtccaac
cgctatatccaggaccgctttctgcccgacaaggcgatcgacctgatggacgaggcttcc
tcgcgcctgcgcatggaggtggactccaagcccgaggcgttggacgaactggaccggcgc
atcatccagctgaaaatcgaacgcgaggcgatcaaaaaggaaaaagacgacgcctcgcgc
gcgcgcttgaaaaccctgaacgaggaacttgaggggttggagggccgttcggcggccatg
accgaggaatggaccagcgaaaaatcggccctggccgacgccaccaagattaaggaggaa
ttggatcgtacgcgcatcgaactggacaaggcgatgcgcgagggacgctacgaaaaagtc
ggtgagttgcaatacgacgccattcccatgcttgagaaaaaactcgccgaaagcgaacag
cgcggcgaagggcatatcttggaagaggcggtaatgcccgaacacatcgcctcggtggtg
tcgcgttggaccgggattcccgtcgataaaatgcttcagggcgagcgcgaaaagctgctc
ggcatggaagacaacctgcgccgtcgcgtggtcgggcagaacgaggctctcgtcgccgtc
tccaacgcggtgcgccgcgcccgcgccggcctgcaagacgccaatcgtccgatcggatcg
ttcttgttcctgggtccgaccggcgtcggcaagaccgaattgaccaaggcgttggccgaa
ttcttgttcgacgatgaaaccgcgatggtgcgcatcgacatgtcggaatacatggaaaag
cacgccgtcgcgcggctgatcggcgcgccgccgggctacgtcggttatgaagaaggcggc
ggcctgaccgaagcggtgcgccgccggccctatcaggtgatcttgttcgatgaaatcgaa
aaggcccaccccgacgtcttcaacgtgctgttgcaggtgctggacgacggccgcctgacc
gacggacagggccgcaccgtcgattttcgcaacaccatgatcgtgatgacctccaatctg
ggcggcgagattctcgccaatcaggaagaagggcgcgattcgggtgaagtgcgcagtcag
gtcatggacatcgtgcgccgcgccttccgtcccgaatttctcaatcgcctggacgaggtt
attttgttccatcgcctgttccgcgagaacatgaacgcgatcgtcgatatccagcttggc
catttgcgcgacctgctggctgaacgcaaaatgacgctggagcttagccccgacgcggta
aattggttggccgacaagggctacgatccgatgtatggcgcgcgcccgctcaagagggtg
attcaaagcgcattgcagaacgctctcgccggcatgatcctggagggcaagatcgccgac
ggcgatgcgatccgcgttgatgtcgatggcggggggttgtcggtgaacggagaacatctc
cgggccgcctga
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