Varunaivibrio sulfuroxidans: P3M64_08290
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Entry
P3M64_08290 CDS
T08892
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsu03016
]
P3M64_08290 (truB)
Enzymes [BR:
vsu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
P3M64_08290 (truB)
Transfer RNA biogenesis [BR:
vsu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
P3M64_08290 (truB)
Prokaryotic type
P3M64_08290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WES29652
LinkDB
All DBs
Position
complement(1756455..1757378)
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AA seq
307 aa
AA seq
DB search
MARRRKGIPIHGWLIVDKPAGISSNAVVGRVRRCTGAAKVGHGGTLDPLATGILPLALGE
ATKTVSYVMDGAKGYRFTVRWGERRDTDDGEGAVIATSSARPTRLEVENILGDFIGDIEQ
TPPIFSAIKVDGKRAYALARGGEDVALKPRRVRIERFDLVDMPDADHATFTVTVGKGTYI
RALARDLALKLGTVGYVAMLRRTCVGPFDEKSAISLDNLETLGHSAALENHLLAVATALD
DIPALALTTTEATRLAHGRALSAFHVLSRNPISAHPDEVVRAMDGDRVVALAKIVGGEIR
PLRVLNL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaggcgcaaggggatacctatccacggctggcttatcgtcgataaacccgca
gggatcagctcgaacgccgtcgttggacgggttcgacgttgcaccggggcggccaaggtc
ggtcatggcggcaccttggaccccttggcgacgggtattttgcccctggcgttgggcgag
gcgacgaaaaccgtctcttatgtcatggacggcgccaagggataccgtttcacggtgcgc
tggggggaacggcgcgacaccgatgatggcgaaggggccgtgatcgcgaccagttcggcg
cgcccgacgcgccttgaagtcgaaaatatcctgggcgattttatcggcgatatcgagcaa
acgccgccaattttttccgccattaaggtggacggtaagcgcgcatacgccttggcgcgc
ggcggcgaggatgtggcgctgaaaccacgccgcgtgcgtatcgaacgcttcgatctggtc
gatatgcccgacgccgatcacgccaccttcaccgtcaccgtcggcaagggaacgtatatt
cgcgccctcgcccgcgatttggcgttgaaattgggcacggtcggatacgtcgcgatgctc
aggcggacatgcgtcggcccgttcgatgaaaaatccgcaatttcgctggataatctagag
accctggggcatagtgcggcccttgaaaaccatctgctcgccgttgcgaccgcgctggac
gacatcccggcactggccttgacgacgacggaggccacgagactggcgcatgggcgggcg
ttatcggcctttcatgttctttctcgaaacccaatttcggcgcaccccgatgaggtggtg
cgcgcgatggatggggatcgggtggttgcgttggccaaaattgtgggcggcgaaattcgc
cccctgcgcgttcttaacctctaa
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