Varunaivibrio sulfuroxidans: P3M64_09255
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Entry
P3M64_09255 CDS
T08892
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu03030
DNA replication
vsu03430
Mismatch repair
vsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P3M64_09255 (dnaQ)
03430 Mismatch repair
P3M64_09255 (dnaQ)
03440 Homologous recombination
P3M64_09255 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsu03032
]
P3M64_09255 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_09255 (dnaQ)
Enzymes [BR:
vsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P3M64_09255 (dnaQ)
DNA replication proteins [BR:
vsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P3M64_09255 (dnaQ)
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P3M64_09255 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF3131
Motif
Other DBs
NCBI-ProteinID:
WES29832
LinkDB
All DBs
Position
complement(1956866..1957534)
Genome browser
AA seq
222 aa
AA seq
DB search
MREISLDTETTGLDPMAGHRIVEIGCVEMVNHMATGRVFHRYINPERDMPQEAFAVHGLS
EAYLRDFPVFADVAAEFLDFIAADTLVIHNARFDMGFLNAELTKLEYPALDMARTIDTVQ
MARRKFPGAQANLDALCRRFAIDNTERDLHGALLDARLLAEVYLELIGGRQPGLELAGAK
GGQSVIRETRKGRAPRIHAPTPEEEAAHAAFVDTLKEALWKT
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaaatttcactcgacaccgaaaccaccggattggaccctatggcgggccatcgg
attgtcgaaatcggctgcgtcgaaatggtcaaccacatggcgacgggccgggtttttcat
cgctatatcaatccagagcgggatatgccccaagaggcctttgcggtccacggtctatcg
gaggcgtatctcagggattttcctgttttcgccgacgtcgccgcggaatttctcgacttc
atcgccgccgacaccttggttattcacaacgcccgtttcgacatgggatttctcaacgcc
gaattgacgaagctcgaatatccggccctcgatatggcgcgcaccatcgataccgtgcag
atggcgcggcgcaaatttcccggcgcgcaagccaatctcgacgccttatgccggcgcttc
gccatcgacaacacggagcgcgaccttcatggcgcgcttctcgatgcgcgccttctcgcc
gaagtctatctggagctaatcggcgggcgtcagccgggccttgaacttgccggcgcgaaa
ggcgggcagagcgtgatccgtgaaacgcgcaaggggcgcgcgccacgcattcatgcgccg
actcccgaggaggaggccgcccatgcggcgtttgtcgataccctgaaagaggccctctgg
aagacctaa
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