Varunaivibrio sulfuroxidans: P3M64_10520
Help
Entry
P3M64_10520 CDS
T08892
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00250
Alanine, aspartate and glutamate metabolism
vsu00310
Lysine degradation
vsu00350
Tyrosine metabolism
vsu00650
Butanoate metabolism
vsu00760
Nicotinate and nicotinamide metabolism
vsu01100
Metabolic pathways
vsu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
P3M64_10520 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
P3M64_10520 (gabD)
00310 Lysine degradation
P3M64_10520 (gabD)
00350 Tyrosine metabolism
P3M64_10520 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
P3M64_10520 (gabD)
Enzymes [BR:
vsu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
P3M64_10520 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
P3M64_10520 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
P3M64_10520 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
TetR_N
Motif
Other DBs
NCBI-ProteinID:
WES30068
LinkDB
All DBs
Position
2232785..2234254
Genome browser
AA seq
489 aa
AA seq
DB search
MQLKDRALFRQQGYIDGAWVGADDGATFKVVNPADGAVLGAVPDMGAGETRRAIAAAGRA
LAGWRAKTAKERANLLRRWYELILQNQDDLAVLMTAEQGKPLAEAKGEIAYGASFVEWFA
EEAKRVYGDTIPQHGPDKRIVVIKQPIGVVAAITPWNFPNAMITRKCAPALAAGCTVVIK
PAEDTPYSAFALAELAERAGIEKGVINIVSCAKSGAAEVGGELTSNPVVRKVSFTGSTAV
GKLLMAQCAGTVKKISLELGGNAPFIVFDDADLDAAVAGAMASKYRNAGQTCVCANRILV
QDGVYDAFAERLGAAVAGLTVGPGLGAEPVTQGPLINEAAVQKVERLVEDAVNKGARVVT
GGKRHALGGTFFEPTILADVTTTMACANEEIFGPVAPLYRFSDEREAIAVANDTPFGLAA
YFYARDVGRVWRVSEALEYGIVGVNEGIISTEVAPFGGVKESGIGREGSKYGLEDFVEIK
YLCMGGIDK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagatcgcgctcttttccgccaacaaggatacatcgatggggcctgggtc
ggagccgatgatggtgcgacgtttaaggtcgtcaaccccgccgacggcgcggttttgggc
gccgttcccgacatgggcgcgggtgaaacccgccgggccatcgcggcggcggggcgcgcc
ctggcgggatggcgcgccaagaccgccaaggaacgtgccaatttattgcgccgttggtac
gagctgattttgcaaaaccaagacgatttagcggtcttgatgaccgcggaacagggcaag
cccctggccgaggcgaagggtgagatcgcttatggggcgtctttcgtcgaatggttcgcc
gaggaggccaagcgggtctacggcgacaccatcccccagcacgggccggacaagcgcatc
gtcgtcatcaagcagccgatcggcgttgtggcggcgatcacgccgtggaattttcccaac
gccatgatcacgcgcaaatgcgcccccgccctagcggcgggctgcacggtggtgatcaag
cccgccgaggataccccctattcggcgttcgccttggccgaactggccgaacgggcgggg
attgagaagggtgtcatcaacatcgtttcgtgcgccaaatcgggggccgccgaggtcggc
ggtgaactaacgtctaacccggttgtacgcaaggtttcgttcaccggatcgaccgcggtg
ggcaagctgttgatggcccaatgcgcggggacggtgaaaaagatttcgctcgaactgggc
ggcaacgcgccgtttatcgtcttcgacgacgccgacttggacgccgcggtggccggcgcg
atggcgtcgaaataccgcaacgccggacagacctgcgtctgcgccaaccggatattggtt
caggacggcgtttatgacgcctttgccgaaaggttgggcgcggcggtggcgggcctgacg
gtcggccccgggctgggggcggaaccggtcacccaaggtccgctgatcaacgaggcggcg
gtgcaaaaggtcgaacggctggttgaggacgccgttaacaagggggcgcgcgtggtgacc
ggcggcaagcgtcatgccctgggcggaacctttttcgagcccaccatcctcgccgatgta
acgacgacaatggcgtgcgccaacgaggaaattttcggccccgtcgcgccgctctatcgc
ttttccgacgaacgcgaagcgatcgccgtcgccaacgatactccgttcgggctcgcggct
tatttttatgcccgcgatgtcggccgggtgtggcgggtttccgaggctttggagtacggc
atcgtcggcgtcaacgaaggcatcatttcgaccgaggtcgcgccgttcggtggggtcaag
gaatcggggatcggtcgtgagggttcgaaatacggccttgaggattttgtcgagattaaa
tacctgtgcatgggcgggatcgataaataa
DBGET
integrated database retrieval system
