KEGG   Varunaivibrio sulfuroxidans: P3M64_11540
Entry
P3M64_11540       CDS       T08892                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vsu  Varunaivibrio sulfuroxidans
Pathway
vsu00010  Glycolysis / Gluconeogenesis
vsu00020  Citrate cycle (TCA cycle)
vsu00260  Glycine, serine and threonine metabolism
vsu00280  Valine, leucine and isoleucine degradation
vsu00310  Lysine degradation
vsu00380  Tryptophan metabolism
vsu00620  Pyruvate metabolism
vsu00630  Glyoxylate and dicarboxylate metabolism
vsu00640  Propanoate metabolism
vsu00670  One carbon pool by folate
vsu00785  Lipoic acid metabolism
vsu01100  Metabolic pathways
vsu01110  Biosynthesis of secondary metabolites
vsu01120  Microbial metabolism in diverse environments
vsu01200  Carbon metabolism
vsu01210  2-Oxocarboxylic acid metabolism
vsu01240  Biosynthesis of cofactors
Module
vsu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vsu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vsu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    P3M64_11540 (lpdA)
   00020 Citrate cycle (TCA cycle)
    P3M64_11540 (lpdA)
   00620 Pyruvate metabolism
    P3M64_11540 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    P3M64_11540 (lpdA)
   00640 Propanoate metabolism
    P3M64_11540 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    P3M64_11540 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    P3M64_11540 (lpdA)
   00310 Lysine degradation
    P3M64_11540 (lpdA)
   00380 Tryptophan metabolism
    P3M64_11540 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    P3M64_11540 (lpdA)
   00670 One carbon pool by folate
    P3M64_11540 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vsu04147]
    P3M64_11540 (lpdA)
Enzymes [BR:vsu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     P3M64_11540 (lpdA)
Exosome [BR:vsu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   P3M64_11540 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored NAD_binding_8 HI0933_like FAD_binding_2 GIDA FAD_binding_3 AlaDh_PNT_C DAO Thi4 Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: WES30260
LinkDB
Position
2450613..2452019
AA seq 468 aa
MSDTTFDVIVVGGGPGGYVCAIKAAQLGLSVACVEKRETLGGTCLNVGCIPSKALLQSSH
HFETAQREFSAHGITATKLTVDLGVMMARKDKVVDDLTKGIAFLFKKNKVAHFIGAGALV
SADTVKVAGKDGEKTLKGESIVIATGSDVAQIPGIEIDEKQIVSSTGALALDKTPKSLVV
IGGGVIGLELGSVWRRLGAEVTVVEYMDNILPGMDGDLVKQATRTLKKQGMNFKMASKVT
SGKKTKSGVILTVEPRDGGTGETVKADVVLLAVGRRPYTEGLGLDTLGVAMDRRGFVTVD
GDFQTNVAGVFAIGDVIGGAMLAHKAEEEGVALAEILAGGKGHVNYDAIPGVVYTWPEIA
SAGKTEEALKEAGVAYKVGKFPFSANSRAKANGDSEGFVKILTDAASDAVLGVHIIGPGA
GDIIQEVVVAMEFGGSAEDIARTCHAHPGISEAVKEAAMAAWDKPIHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgagtgacacgacatttgacgtcatcgttgttggtggtggtccgggggggtatgtgtgc
gcgatcaaggcggcgcaactcggcctttcggtggcttgcgtggaaaaacgggagaccttg
ggcgggacgtgcctgaacgtcgggtgtatcccgtccaaggcgttgttgcagtcgtcgcat
cattttgaaaccgcgcagcgcgagttttccgcccacggtatcaccgcgacgaagttgacc
gtcgatttgggtgtgatgatggcgcgcaaggacaaggtcgtcgatgacttaaccaaagga
atcgcctttcttttcaaaaagaacaaggtcgcgcatttcatcggcgccggtgcgctcgtg
tccgccgatacggtgaaggtcgccggtaaagacggcgagaaaacccttaaaggcgaaagc
atcgtgatcgccacggggtcggatgtggcgcaaattcccggtatcgaaatcgacgagaag
cagattgtttcatcaaccggggcgctcgccttggataaaacgccgaaaagtctggtggtg
atcggcggcggcgtgatcggcctcgaactgggttcggtgtggcgccggttgggggccgag
gtgacggtcgtcgaatacatggacaacatcctgcccggtatggacggcgatctcgtcaag
caggcgacgcgaaccctgaaaaagcagggcatgaattttaaaatggcttccaaagtgacg
tcggggaagaaaaccaaaagcggcgtgatcctgacggtcgagccgcgcgacggcggaacg
ggtgaaaccgtcaaggccgatgtcgttctgctcgccgtgggccgtcgtccgtataccgag
ggattgggattggacacgcttggcgtcgccatggaccggcgcggcttcgttaccgtggac
ggcgattttcaaaccaacgtcgccggcgttttcgcgatcggggatgtcatcgggggggcc
atgctggcgcacaaggccgaggaagagggcgtcgccctcgccgaaatcctcgcgggaggc
aaaggtcacgtcaattacgatgctattccgggcgtggtctacacttggccggaaatcgcc
tccgccgggaagaccgaagaggcccttaaggaggcgggcgtcgcttataaagtggggaaa
ttcccctttagcgccaattcccgcgccaaggccaatggcgatagcgaaggctttgtcaag
attttgaccgacgcggcgagcgacgccgttctcggcgtccatatcatcgggccgggcgcc
ggggatattatccaagaggtcgtcgtggcgatggagttcggcggctcggccgaggatatc
gcgcggacctgccatgcccaccccggaatttccgaggcggtcaaggaggcggcgatggcg
gcgtgggacaagccaatccatatgtaa

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