Varunaivibrio sulfuroxidans: P3M64_11710
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Entry
P3M64_11710 CDS
T08892
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu03420
Nucleotide excision repair
vsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P3M64_11710
03430 Mismatch repair
P3M64_11710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_11710
Enzymes [BR:
vsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P3M64_11710
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P3M64_11710
MMR (mismatch excision repair)
Other MMR factors
P3M64_11710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF5539
AAA_16
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
WES32228
LinkDB
All DBs
Position
2492420..2494657
Genome browser
AA seq
745 aa
AA seq
DB search
MASDGAPRALSARHLERLNETQRRAVETTDGPVLVLAGAGTGKTRVLTTRLGHILLSGKA
HPQEILAVTFTNKAAREMKERVADLVGRPVEGWWIGTFHALAARVLRRHADLVGLKSNFT
ILDTDDQNRLIKELLPAQGIDSQRWPPKVVGGVLQRWKDRALGPEKVTGAEGSDIAEGRV
VALYRAYQERLKQLNAADFGDLLLHCVTIFQAAPDVLARYQERFRYILVDEYQDTNVAQY
LWLRLLAQKHKNICCVGDDDQSIYSWRGAEVGNILRFEKDFPGAVIIRLERNYRSTPHIL
AAASGLIAHNQGRLGKTLWTDLDGGEKVRVRGVWDSPQEARAIGDEMETLHRRGDPLSSM
AVLVRTGAQTRELEECLITMGIAYRVVGGLRFYERQEIRDVVAYLRVIAQPDDDLAFMRI
VNLPKRGLGEASLRDVHLYARAQGISLYRAAGRLVETDELRPAARRALGALIAHFEAWRG
RSAEIKLAELLDQVLNGSGYLQMWREDKALDAPGRVENLKELTVGIEPFETLEMFLEHVA
LVMENETASEDDKVTLMTLHGAKGLEFDTVFMPGWEEGLFPHQRALDETGTRGLEEERRL
AYVGLTRARQRAVILFAANRRIFGQWKSALPSRFLEELPGEHVERIVETGLYGNAGINAG
SGGPGVPVAFPARLRAAPRTGQEASRRRTQGADDDAPFGVGVRVFHQKFGYGRVRAVDGD
KLEIAFDKAGVKKVMTSFIRPADAL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgatggcgccccgcgggcgttgtcggcgcgtcacctcgaacgtctgaacgaa
acgcaacgccgggcggtcgagacgaccgacggtccggtgctggtgttggcgggggcgggg
accggcaaaactcgggtgctgaccacccgcctcgggcatatcctcctcagtggcaaggcg
catccccaggaaattctcgccgtgacctttaccaacaaggccgcgcgcgagatgaaggaa
cgggtcgccgatttggtgggccgacccgtcgaggggtggtggatcggcacctttcacgcc
ctggcggcgcgggttttacgccgtcacgccgatttggtcggcctgaaatcgaatttcacc
atcttggacaccgacgatcaaaatcgtttgatcaaggagcttttgcccgcccagggcatc
gattcccagcgctggccgcccaaagtcgtgggcggagttcttcagcgctggaaagaccgc
gccctcggcccggaaaaggtgaccggggcggaaggctcggacatcgccgaggggcgcgtt
gtggctctttatcgcgcctatcaggagcggttgaaacagcttaacgcggcggatttcggc
gatctactgcttcattgcgtgaccatatttcaggccgcgcccgatgttctggcgcgctat
caagagcggttccgctacatcctggtcgatgaataccaggacaccaacgtcgcccagtat
ctatggctacgcctgcttgcgcagaagcacaaaaatatttgctgcgtcggcgatgacgat
cagtcgatttattcgtggcggggcgccgaggtcggcaatattctgcgcttcgagaaggat
tttccgggcgccgtgattatccgtctggaacgcaattaccgatcgacgccgcatatcttg
gcggcggcgtcgggcctgatcgcacacaaccagggacgcttgggaaagaccttgtggacc
gatcttgacggcggcgagaaagtccgtgtgcggggtgtctgggacagtccccaggaagcc
cgcgccatcggcgatgagatggagaccctccaccgccggggcgaccccctcagttcgatg
gcggtgctggtgcgcacaggcgcgcagacccgcgaactggaagaatgcctaataaccatg
ggcatcgcttaccgtgtggtcgggggattgcgcttttatgaacgccaggaaattcgcgat
gtggtggcgtatctgcgcgtgatcgcccaacccgacgacgacctagcgttcatgcgcatc
gtcaaccttcccaaaagagggctgggcgaggcgtccctgcgcgatgtccacctgtacgcc
cgcgcccagggcatttccctgtatcgagcggccggacgcttggtcgaaaccgacgaattg
cgccccgccgcccggcgcgccctgggtgcgctgatcgcgcacttcgaagcctggcgcggg
cggagcgccgaaatcaaactggcggaactgctcgatcaggtgttgaacggttcgggatat
ctgcagatgtggcgcgaggacaaggcgctggacgccccgggccgagtcgaaaacctaaag
gaattaacggtcgggatcgagccgttcgagactttggaaatgtttctcgagcacgtcgcc
ctggtgatggagaacgaaaccgcgagcgaggacgacaaagtcaccttgatgacgctgcac
ggcgcgaaaggcctggagttcgacaccgttttcatgcccggctgggaagagggcctgttc
ccgcatcagcgcgcgctggacgaaaccggaacccgggggctcgaagaggaacgccgtctg
gcctacgtcggcttgacccgcgcgcgtcaacgcgcggtgattttattcgccgccaaccgg
cgtatttttgggcaatggaaaagtgcgctgccgtcgcggtttctcgaagaattgcccggg
gagcatgtcgagcgcatcgtcgagacgggactgtacggcaacgcggggatcaacgccggg
tcgggtggaccgggggttcccgtggcgtttcccgccagattgcgcgcggccccccgtacc
gggcaggaagcgtcgcggcggcggacgcaaggcgcggacgacgatgcgccgttcggtgtt
ggagtgcgggtgtttcatcaaaaattcggttacggtcgcgtgcgcgccgttgacggcgat
aaactggagatcgccttcgataaagcgggcgtcaaaaaggtcatgacctcctttatacgc
cccgccgacgcactttaa
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