KEGG   Varunaivibrio sulfuroxidans: P3M64_11945
Entry
P3M64_11945       CDS       T08892                                 
Name
(GenBank) LAGLIDADG family homing endonuclease
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
vsu  Varunaivibrio sulfuroxidans
Pathway
vsu00230  Purine metabolism
vsu00240  Pyrimidine metabolism
vsu01100  Metabolic pathways
vsu01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:vsu00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    P3M64_11945
   00240 Pyrimidine metabolism
    P3M64_11945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsu03400]
    P3M64_11945
Enzymes [BR:vsu01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     P3M64_11945
DNA repair and recombination proteins [BR:vsu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    P3M64_11945
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_lgN TSCPD Intein_splicing RNR-II_ins_dom LAGLIDADG_WhiA Hint
Other DBs
NCBI-ProteinID: WES30337
LinkDB
Position
2547789..2551277
AA seq 1162 aa
MAQMASISHQIWDMKYRLKDADGHPVDKGVADTWRRIAKAVAASERNPGDWEDRFYRAME
DFRFLPAGRIVAGAGAGRQVTLFNCFVMGDIPDDMGGIFDALKDAALTMQQGGGIGYDFS
TLRPKGARVGGVGADASGPLPFMDVWDSMCRTIMSAGSRRGAMMGVLRCDHPDIEDFIDA
KCAPGRMRMFNLSVLVSDDFVRAVKENAPWDLVFDGVVYRTVKARDLWDKVMRATYAYAE
PGVIFIDRINRANNLWYCETIHATNPCVTADTWVQTDQGPRQVAQLHGGPFRAIVDGRPY
ESAKQGFFSTGVKNILRLTTKEGHALRLTANHPVRKVVRKTRHTLDSDWVPAGNLAPGDE
IVLHDHRSYGTWGGRGSEQEGYLLGLLVGDGALKQDKAVLSVWLARSVVNGGNGAAGAHG
VMDAALAAALTLPHRADFRGWTEVKGRDEFRMSPGALKTLAHDMGMAPGARNVTPEIERT
SSDFYCGFLRGFFDADGSVQGAQKKGVSVRLAQSDLERLRAVQRMLLRLGVNSTIYQDRR
PAGKRSLPDGRGGRREYECAANHELVISGANLEGFAERIGFADIDKMLRLKSALSGYKRV
LNRERFIATVDVLVADGSEEVFDVQIPGANAFDANGLYVHNCGEQPLPPYGACLLGSINL
AKMVGDPFTDDAALDVVALRAVVGDAVRFLDDVIDVSNFPLPQQRHEALSKRRIGLGVTG
LADALILCGARYGSARGVALCETWFREIERAAYFASVEIAKEKGPFPLFDREKYLRGEKI
KGLDADLRAAIAEHGIRNSHLTSVAPTGTISLYADNVSSGLEPVFSFKYSRNVLQPDGAR
RAEDVVDYAYRQFHRIKGEDAPLTEAFVDAMDLSPKDHLVMQAAAQRFVDSSISKTINVP
EDIPFDSFKDIYMQAFDAGCKGCTTYRPNTVTGAVLEVKKERKKPAPVEPELPFATPGMA
TTNIRPKDIGDSGAVARLFRPLDRPDALPGETYKVHWPESDHAIYITLNDLIDENGRRRP
FEVFINSKNMEHYAWTVALTRMISAVFRRGGDVSFVVEELKAVFDPRGGQWVKGKYVPSL
LAAIGDIIEQHMIATGFLHASWSGGGGQNPEPETPPQSANNPGDVEGKGGARFKTCPKCA
QPGFIHQEGCDSCLSCGYSKCG
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggcgcaaatggcatccatatcgcatcaaatctgggacatgaaataccgactcaaagat
gccgacggacacccggtggacaagggcgtcgccgatacctggcggcgtatcgccaaggcc
gtcgcggcgagcgaacgaaatcccggcgattgggaagatcgtttttaccgagcgatggag
gattttcgcttccttcccgcgggcagaatcgtcgccggagcgggggccgggcgccaggtg
acgctgttcaactgcttcgtcatgggcgatattcccgatgacatgggcggtattttcgac
gccctgaaagacgccgcgctgaccatgcagcagggcggtgggatcgggtacgatttttcc
acgttgcgtcccaagggcgcgcgggttgggggcgtcggggcggatgcttcgggaccgctg
ccgttcatggacgtttgggattcgatgtgccgcacgatcatgagcgcgggctctcggcgc
ggcgcgatgatgggcgttttgcgctgcgatcatccggacatcgaagacttcatcgacgcc
aagtgcgcgccagggcggatgcggatgttcaacctgtcggtcctggtcagcgacgatttc
gtccgcgcggtcaaggaaaacgcaccctgggatctggtcttcgacggcgtggtctatcgt
accgttaaggcgcgcgatttgtgggacaaggttatgcgtgcgacctacgcctacgccgaa
cccggtgtgatcttcatcgaccgcatcaaccgcgccaacaatctgtggtattgcgaaacc
atccacgccaccaacccgtgcgtgacggcggacacttgggtgcagacggatcaaggcccc
cgccaagtcgcgcaactgcacggtgggccatttcgagccattgtcgatggccgcccttat
gaaagcgcgaaacagggatttttctcgacgggggtgaagaatatcttgcgcctgacgacg
aaggaggggcatgccctgcgcctgacggcgaatcatccggtgcgcaaggtcgtccgtaag
acgcgccatacgctggatagcgattgggtgcccgccgggaatttagccccgggcgatgaa
atcgtgttgcacgatcatcgttcatacggcacatggggtgggcgcgggtccgaacaagaa
ggctaccttctaggtctgctggtcggtgacggcgcgttgaagcaagacaaggccgtcttg
agcgtctggctggcgcgttctgtggtgaacggcgggaatggcgcggcgggcgcacacggc
gtcatggacgcggccctcgcggcggcgctgacccttcctcatcgtgcggatttccgggga
tggacggaggttaaaggccgggatgagttccgcatgagcccgggtgcgctgaaaaccctg
gcgcatgacatggggatggcgcccggagcgagaaacgttacgcccgaaatcgaacgcaca
tcgtctgatttttattgtggatttttgcgtggctttttcgatgccgacggctccgttcag
ggggcgcagaaaaagggcgtcagcgtcaggctggcgcaaagcgatctcgaacggctgcgc
gcggttcagcgtatgctgctgcgcctgggcgtcaattccaccatctatcaagaccgccgt
cccgccgggaaacgctccttgcccgacggtcggggggggcggcgggaatatgagtgcgcg
gcgaatcacgaactcgtgatttccggcgctaatcttgaggggtttgccgaacggatcggt
tttgccgatatagataaaatgctgcgcttaaaaagcgcgctgtcgggctataagcgcgtc
ttgaaccgggagcgcttcatcgcaaccgtcgatgtgcttgtggcggatggaagcgaagag
gtttttgacgtccaaataccgggcgcaaatgcgttcgacgccaatggcctgtatgttcac
aactgtggcgaacagccattgccgccctatggggcgtgccttttagggtcgatcaatctg
gcgaagatggtcggcgatccgttcaccgacgatgccgcgttggatgtggtggcgctgcgc
gccgtcgtcggcgatgcggtgcgctttttggacgatgtcatcgacgtgtctaattttcca
ctgccccagcaacgccacgaggcgttgtcgaaacggcggatcggcctcggcgtgaccggc
cttgccgacgcgctgatcttgtgcggcgcgcgctacggctcggcgcggggcgtcgcgctg
tgcgaaacctggtttcgcgagatcgagcgggcggcttatttcgcgtcggtcgagatcgcc
aaggaaaagggcccgttccctcttttcgatcgggaaaaatatctccggggtgaaaagatc
aaagggctcgacgccgatctgcgcgccgcgatcgccgagcacggcatacgcaattcgcac
ctcacgtcggtcgcgccgacggggaccatctcgctgtatgccgataacgtctccagcggt
ctggagccggtgttcagcttcaaatacagccgtaacgtcctgcaaccggacggcgcccgc
cgcgccgaagatgtggtcgattacgcctatcgtcaattccacaggatcaagggagaagat
gcgccgctgacggaggccttcgttgacgccatggacctgagtccgaaagaccatctggtg
atgcaggcggcggcgcagcgctttgttgacagttcgatttcgaaaaccatcaacgtgccc
gaagacattcctttcgacagcttcaaggacatctacatgcaggccttcgacgccggttgc
aaggggtgtacgacgtatcgccccaacaccgtcaccggggcggtgctggaagtcaagaaa
gagcgcaagaagcccgccccggtcgaaccggagctgcctttcgccacgccgggcatggcc
accaccaacatccgccccaaggatatcggcgacagcggggccgtcgcccggcttttccga
ccgctcgaccgtcccgacgccctgccgggggaaacctacaaggtgcactggccggaaagc
gaccatgccatttacatcacgctgaacgatttgatcgacgaaaacggtcgtcgccgcccg
ttcgaggtgttcatcaactcgaaaaacatggaacactacgcctggacggtggccctgacg
cggatgatctccgccgtcttccgtcgtggcggcgatgttagcttcgtggtcgaggaactg
aaggccgtcttcgatccccgtggcgggcaatgggtcaagggcaagtacgtaccctcgttg
ctggcggcgatcggcgacatcatcgaacagcatatgatcgccacgggatttttgcacgcc
tcctggtcgggcggcggcgggcaaaacccggagcccgaaacgccgccgcaaagcgcgaac
aaccccggcgatgtcgaggggaaggggggggcgcgctttaagacctgccccaaatgcgcc
caaccgggctttatccaccaggaaggttgcgacagctgcctgtcgtgcggctattcgaag
tgcggctag

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