Varunaivibrio sulfuroxidans: P3M64_12105
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Entry
P3M64_12105 CDS
T08892
Symbol
serA
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00260
Glycine, serine and threonine metabolism
vsu00270
Cysteine and methionine metabolism
vsu00680
Methane metabolism
vsu01100
Metabolic pathways
vsu01110
Biosynthesis of secondary metabolites
vsu01120
Microbial metabolism in diverse environments
vsu01200
Carbon metabolism
vsu01230
Biosynthesis of amino acids
Module
vsu_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
P3M64_12105 (serA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
P3M64_12105 (serA)
00270 Cysteine and methionine metabolism
P3M64_12105 (serA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsu04147
]
P3M64_12105 (serA)
Enzymes [BR:
vsu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
P3M64_12105 (serA)
1.1.1.399 2-oxoglutarate reductase
P3M64_12105 (serA)
Exosome [BR:
vsu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
P3M64_12105 (serA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
PGDH_inter
2-Hacid_dh
ACT
KARI_N
AdoHcyase_NAD
HutP
Motif
Other DBs
NCBI-ProteinID:
WES30368
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All DBs
Position
2586090..2587667
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AA seq
525 aa
AA seq
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MPKVLISDKMSPRAAEVFKARGVEVDVKPGMTPDELKACIGQYDGLAVRSATKATAEIIA
AADNLKVIGRAGIGVDNIDIKAATAKGIVVMNTPFGNSITTAEHAISMMMALARQLPLAN
ASTQAGKWEKSRFMGVELMGKTFALIGCGNIGAAAADRAQGLKMKVIAYDPYLSPERAKD
LGVEKVELDDLFARADFISLHTPLTDATRGIINAEAFAKMKDGVRVINCARGGLVDEAAL
KVAIESGKVAGAALDVFEVEPAKENPLFGMEQIVATPHLGASTTEAQVNVAVQVAEQLSD
YLLTGAVVNALNMPSVSAEEAPKLRPYMKLAEQLGSFAGQLTQTGIKSVSIEYEGQAAEL
NTKPLTAIVLQGVLSPQLEAVNMVSAPAIAKERDIDVSEIKHERPGAYQTLIKLTLTTET
QTRSVSGTLFNGQNPRLVEIKGIPIDAKLGTHMLYITNKDEPGFIGKLGTALGAEKANIA
TFNLGRAEAGGDAIALIEVDSAVSDAFIENLRAMPEVVQALHLTF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagtccttatttccgataaaatgagcccccgcgccgccgaggttttcaaggcc
cgtggcgtcgaggtcgatgtcaaacccgggatgacgccggatgaactgaaagcgtgcatc
ggtcagtacgacggcctcgccgtgcgttcggcgaccaaggccaccgccgagatcatcgcc
gccgccgacaacctgaaggtcatcggccgcgccggtatcggtgtcgataacatcgatatc
aaggccgccaccgccaagggaatcgtggtcatgaacacgcccttcggcaactcgatcacg
acggccgaacacgccatttccatgatgatggcgctggcccgccagttgcctttggccaac
gcttccacccaagccggaaagtgggaaaaatcccgcttcatgggcgtcgaattgatgggc
aagacctttgcgctgatcggctgcggcaatatcggcgcggcggcggccgaccgcgcccag
ggcctgaagatgaaagtgatcgcctacgacccctatctgtcgcccgagcgggccaaggat
ctgggcgtggaaaaggtggaactggacgacttgttcgcccgcgccgatttcatcagcctg
cacaccccgttgaccgacgcgacccggggcatcatcaacgccgaggccttcgccaagatg
aaggacggcgtgcgcgtcatcaactgcgcgcgtggcggtctggtcgatgaagcggcgctg
aaagtcgccattgaaagcggcaaggtggcgggcgcggcgctcgacgtcttcgaggtcgag
ccggcgaaggaaaatcctctgttcgggatggaacagatcgtcgccaccccgcacctcggc
gcatcgaccaccgaggcccaggtcaacgtcgccgttcaggtcgccgaacagctttcggac
tatctgcttaccggcgccgtcgtcaacgcgctgaacatgccgtcggtcagcgccgaggaa
gcgcccaaactgcgtccctacatgaagttggcggaacaactgggctcgttcgccgggcag
ttgacgcaaaccgggatcaaatcggtgagcatcgaatacgaaggccaggccgccgagctg
aacaccaaaccgctgacggcgatcgtccttcagggcgtgctttccccgcagttggaagcg
gtcaacatggtcagcgcgcccgcgatcgccaaggagcgcgatatcgacgtcagcgaaatc
aagcatgaacgcccgggtgcgtatcagaccttgatcaagctgaccttgaccaccgagacc
cagactcgcagcgtttcggggactttgttcaatggacaaaatccgcgcctggtcgaaatc
aaggggattccgatcgacgccaagttgggcacgcatatgctgtacatcaccaacaaggac
gagccgggcttcatcggcaaattgggcaccgccttgggggcggagaaggcgaatatcgcg
acgttcaatctgggccgcgccgaggcgggcggcgacgccatcgccctgatcgaggtcgat
agcgccgtcagcgacgcgtttatcgaaaacttgcgcgccatgcccgaggtcgttcaagcc
ttgcatctgacgttctaa
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