Varunaivibrio sulfuroxidans: P3M64_12435
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Entry
P3M64_12435 CDS
T08892
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsu03009
]
P3M64_12435 (rimO)
Enzymes [BR:
vsu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
P3M64_12435 (rimO)
Ribosome biogenesis [BR:
vsu03009
]
Prokaryotic type
ribosomal protein modification factors
P3M64_12435 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Motif
Other DBs
NCBI-ProteinID:
WES30433
LinkDB
All DBs
Position
complement(2661603..2662955)
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AA seq
450 aa
AA seq
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MNTPPKTPPKVGIVSLGCPKALVDSERILTRLAAEGYQISDSFEGADVVLVNTCGFLDSA
RRESLDAIGEAMNRNGRVIVTGCMGIDENAIRTVHPDVLSVTGPHQYAAVIDAVHRARPP
AHAPFVDLVPKEGLHLTPRHYAYLKISEGCNHDCSFCIIPDIRGKLVSRLAGDVLGEAER
LVEAGVRELLVISQDTGAYGLDTGYAADTWRGNAVETRIAPLAEALGSLGVWVRLHYVYP
YPHVDNLVPLMAEGKILPYLDIPFQHASPRVLKAMRRPAHQEKILGRIEKWRAQCPDIAV
RSTFITGFPGETEEEFEFLLDWLEEARLDRVGCFKYEAVAGAQANALAEDIDEDIKQDRW
ERLMDLQQEISAARTKAKVGRTFDVLIDRVDDDGAVGRTYADAPEIDGTVLLDDAQDINE
GDMIRARIVAGDEYDLWAVRADGKAPKSDF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaataccccgccgaaaacgccgcccaaggtgggtatcgtcagccttggttgccccaag
gccctggtcgattccgagcggatattgacccgtctcgccgccgaagggtatcaaatttcc
gacagtttcgaaggcgccgacgtggtgctggtcaacacctgcggttttctcgacagcgcc
cgccgggaatccctggacgccatcggcgaggcgatgaaccggaacggccgggtcatcgtc
accggctgcatggggatcgacgagaacgcgatccgcaccgttcatcccgacgtgctatcg
gtcaccggcccccaccaatacgcggcggtgatcgacgccgtgcaccgcgcccgcccgccg
gcgcacgcccccttcgtcgatctggtgcccaaggaaggcctccacctgacgccgcgccat
tacgcgtacttgaagatttccgaaggctgcaatcacgactgcagcttctgcatcatcccc
gacattcgcggcaagctcgtcagccgcttagcgggcgacgtgctgggcgaggccgaacgc
ctggtcgaggccggcgtgcgcgaattgctggtcatcagccaggacaccggggcctatggc
ctggacaccggctatgccgccgacacctggcgcggcaacgccgtcgaaacccggatcgcc
cccctggccgaggccctagggtcgttgggcgtgtgggtgcgcctgcattacgtctatccc
tacccccacgtcgataacctggtgccgctgatggccgagggcaaaattctgccctatttg
gatatcccctttcagcacgccagcccgcgcgtcctcaaagccatgcgccgccccgcccac
caggaaaaaatcctgggtcggatcgaaaaatggcgcgcccagtgcccggacatcgccgtt
cgctcgaccttcatcaccgggttccccggcgagaccgaggaagaattcgagtttctttta
gactggctcgaagaagcccggctcgaccgcgtcggctgttttaaatacgaggcggtcgcc
ggggcccaggccaacgccctcgccgaggacatcgacgaggatatcaagcaggaccgctgg
gaacgcctgatggacctgcaacaggaaatcagcgccgcgcgcaccaaggccaaggtcgga
cgcaccttcgacgtactgatcgaccgggttgacgacgacggcgccgtcggacggacctac
gccgacgccccggaaatcgacggcacggttttgctggacgacgcccaggatatcaacgaa
ggcgacatgatccgcgcacgcatcgtcgccggcgacgaatacgatttgtgggccgttcgc
gccgacggtaaagcccctaaatcggatttttag
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