Varunaivibrio sulfuroxidans: P3M64_13825
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Entry
P3M64_13825 CDS
T08892
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsu03009
]
P3M64_13825
Enzymes [BR:
vsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
P3M64_13825
Ribosome biogenesis [BR:
vsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
P3M64_13825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
MTS
DUF6966
Motif
Other DBs
NCBI-ProteinID:
WES30692
LinkDB
All DBs
Position
2964886..2966238
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AA seq
450 aa
AA seq
DB search
MKQGTFASRPRKRRPKKGAKSPQDGRKIDAEVETIGGQGDGLVHLDGALYFAPDTVPGDR
ITARVGAARGGGHVLEDIVRHEDGPTRIRPFCGHAGACGGCVAQHMSDAAYRLWKVERIG
EALTRRGLGDVEIEPLVTTPLGARRRLTLSAVRRGGKVSLGFNARRAHRVVDLEGCPLAA
PALCALFAPLRDLFAALAREGLALDKAVQVLLTACDGGLDAVFRASCAPNLNMRQRLVDF
AARFDLARVSWDNADGAGPEAIVVHREPYMTFAGTRVALPQGGFLQASAEGERAITAAIA
RRVGGAARIAELYCGMGSFTFALAQIAPVFAVEGFAPAVRALERAAGRAGLGGMIRAEVR
DLDRAPLDARELKRFDTVVFDPPRAGAAAQAAALAHGAARTIVAVSCNPATFARDARILV
DGGYALQSLTPIDQFAYSAHVELVAGFAKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagggaaccttcgcatcgcgcccgcgcaagcgacgcccgaagaagggcgccaag
tcgccccaagatgggcgcaaaatagacgccgaggtcgagaccatcggcgggcagggcgac
ggcctcgttcaccttgatggcgccctttatttcgctcccgacacggtgcccggagaccgg
atcacggcgcgggtgggcgctgcgcgcggcggcggccatgttctggaagatatcgtgcgc
catgaggacggtcccacgcgtatccgtccgttttgcgggcatgccggcgcatgtggcggt
tgcgtcgcacaacacatgtcggatgcggcgtaccgcctttggaaagttgaacggattggc
gaagccttgacgcgccgagggctgggcgacgttgaaattgagcctctggtgacgacgccg
ctgggcgcgcgccgccgccttacgctcagtgcggtgcgtcgtgggggcaaagtttccctg
gggttcaacgcgcgccgcgcgcatcgtgtcgtcgatctggaagggtgcccgctggcggcg
ccggcgttgtgcgctttgttcgcgccgctgcgcgacctgttcgccgccttggcgcgcgag
gggctggcgctggacaaggcggtgcaagtcctgctgacggcctgcgatggcggcctcgac
gccgtgttccgcgcttcttgtgcgcccaacctgaatatgcgtcaacggctcgtcgatttc
gccgcgcgcttcgacctagcccgagtgtcgtgggacaacgccgacggcgcgggtcccgaa
gccatcgtcgtgcatcgggaaccgtatatgacctttgcgggtacgcgcgtggccttgccc
caggggggatttctacaagccagcgccgagggtgaacgcgccattaccgcggccatcgcc
cggcgtgtcggcggggcggcgcgcatcgccgagctgtattgcggcatgggcagttttacc
ttcgccctggcgcaaatcgcgccggttttcgccgtcgagggcttcgctcccgcagtacgc
gcactggaaagggcggcaggtcgggcaggtttgggtggcatgattagggccgaggtgcgc
gatctcgatcgcgcgcccctagatgcgcgggagcttaagcgatttgacaccgttgttttc
gatcctccgcgcgcgggggcggcggcgcaggcggcggccttggcgcacggcgcggcgcgc
acgattgttgcggtctcgtgcaacccggcgacgttcgcccgcgatgcgcgcatccttgtt
gacggcggctacgccttacaatcgttgacgccgatcgatcagtttgcgtattccgcgcac
gtcgaactggtcgccgggttcgctaagaaataa
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