Vibrio syngnathi: K08M4_00160
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Entry
K08M4_00160 CDS
T09193
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00071
Fatty acid degradation
vsy00280
Valine, leucine and isoleucine degradation
vsy00310
Lysine degradation
vsy00362
Benzoate degradation
vsy00380
Tryptophan metabolism
vsy00410
beta-Alanine metabolism
vsy00640
Propanoate metabolism
vsy00650
Butanoate metabolism
vsy00907
Pinene, camphor and geraniol degradation
vsy00930
Caprolactam degradation
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01120
Microbial metabolism in diverse environments
vsy01200
Carbon metabolism
vsy01212
Fatty acid metabolism
Module
vsy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K08M4_00160 (fadB)
00650 Butanoate metabolism
K08M4_00160 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K08M4_00160 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K08M4_00160 (fadB)
00310 Lysine degradation
K08M4_00160 (fadB)
00380 Tryptophan metabolism
K08M4_00160 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K08M4_00160 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K08M4_00160 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K08M4_00160 (fadB)
00930 Caprolactam degradation
K08M4_00160 (fadB)
Enzymes [BR:
vsy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K08M4_00160 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K08M4_00160 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K08M4_00160 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K08M4_00160 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
ARP36869
UniProt:
A0AA34TL70
LinkDB
All DBs
Position
1:complement(17840..20011)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKQAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKSYQDLGAMYQVPQLLLDMAAKGESFYDGQQA
SSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaccttacaggtaaaggaattacaagatggtattgcagaactt
agcttctgtgctccggcctctgtaaacaaactcgaccttgctactttagaatcactggat
aaagcgttagatgctcttaatgctcacgctggattacgtggtttaatcttaacttcaaac
aaagacgcgttcatcgtaggcgcagacatcactgaatttcttggcctatttgctaagcca
gaagcagaacttgatgaatggttaagattcgctaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgcccttggtggcggctgtgaatgt
gtactcgctaccgatttccgtatcggtgacaagaccactagcataggtctaccagaaacc
aaacttggcatcatgcctggctttggtggttgtgtgcgcctgccacgtgttatcggtgct
gacagcgcgatggaaattatcactcaaggcaaagcatgccgtgcagatgaagcgcttaaa
gttggcttgttagatgcgattgttgaaacagaccaactactagaatcagcgatcaacact
gtttctttggcagccaatgagaaacttgattggcagctacgccgcaaacaaaaaacgtca
gcgctttcactaagcaaactagaagcgatgatgagctttaccatggctaagggcttagtg
gctcaaaaagcaggacctcattacccagcacccatcacttcggtgattgctatcgaagaa
gcagcgcgcagcgatcgcgatgcggcgttagacatcgaacgcaaacacttcgttaagcta
gcaaaatctgaagaagcgaaagcccttgtcggtttattcttgaatgaccaatacattaaa
ggcttagcaaaacaagctggtaagtctgcgaataaagcaactgaacgcgcagcagtactt
ggcgctggcatcatgggtggcggtattgcttaccagtcagcattgaaaggcgtgccagtg
atgatgaaagacatcgcacaagcgtctcttgatcttggtatgaacgaagcttctaagctg
ttgaataaacgcttatcacgcggtcgcctagatgggttcaagatggcaggtattctgtct
tctattactccaagcttgcattatgctggtgttgaacaatctgatgtgattgtggaagcg
gttgtagaaaacccgaaagtaaaagcagcagtactgagtgaagttgaaggcctagttggt
gaagacacggttctaacatcaaatacctcaacgattccgattaacctgttagcgaaatct
ttgaagcgcccagagaacttctgtggcatgcacttctttaacccagtacaccgcatgcct
ttggttgagatcatccgtggcgagcatacttcagaagaaactattaatcgcgtggttgct
tacgcagcgaagatgggtaaatcccctatcgttgttaacgactgtccaggcttcttcgtt
aaccgtgtacttttcccttactttggcggtttcagcatgttgctacgtgacggtgctgat
ttcactaagatcgataaagtcatggaacgcaagttcggttggccaatgggcccagcttac
ttgctagacgttgtaggtttagacacagcacaccatgcacaagcagtaatggcgcaaggt
ttccctgagcgcatgggtaaagaaggtcgtgatgcgattgacgcactttacgtcgctgaa
aaatacggccagaagaacggcagcggtttctacacgtacagcgtagacaaacgcggtcgt
ccgaagaaaaccttctctgaagacattcttcctatcttggctgacgtatgccaacagcca
caagactttgatgaccagacaattatccaacgtgtgatgattcctatgatcaacgaagtg
gtgctttgtttagaagaaggcatcatcgcgacaccacaagaagcggatatggcactggtt
tacggtttaggcttccctccattcagaggcggcgtattccgctacttagacagtgtgggt
attggtaacttcgttgaaatggcgaagagctaccaagacttaggtgcaatgtaccaagtt
cctcaactattgcttgatatggcagcgaaaggcgaaagcttttacgacggccaacaagcc
agttctctgtaa
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