KEGG   Vibrio syngnathi: K08M4_00840
Entry
K08M4_00840       CDS       T09193                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vsy  Vibrio syngnathi
Pathway
vsy00300  Lysine biosynthesis
vsy00470  D-Amino acid metabolism
vsy01100  Metabolic pathways
vsy01110  Biosynthesis of secondary metabolites
vsy01120  Microbial metabolism in diverse environments
vsy01230  Biosynthesis of amino acids
Module
vsy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    K08M4_00840 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    K08M4_00840 (dapF)
Enzymes [BR:vsy01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     K08M4_00840 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ARP36920
UniProt: A0AA34TL01
LinkDB
Position
1:89774..90604
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYSINVSTKKGKMVLKIEENDLITVNM
GIPEFEPGKIPFKAKQPEKTYILRTDVHTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPL
LESHERFPERVNAGFMQVVNREEVRLRVYERGAGETQACGSGACGAVAVGITQGLLAENV
KVRLPGGDLHISWQGPGKPLFMTGPATHVFDGQLSC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcacttccacttttctaaaatgcatggtttgggcaatgatttcatggtcgtggactgc
attactcaaaatattttcttttctccagatttgattcgtcgtttggcggatcgtcacact
ggtgtgggtttcgatcagctacttgtcgttgaagctccctatgaccctgaaactgacttc
cattaccgcatatttaatgcagatggcagtgaagtggagcagtgtggtaatggtgcgcgt
tgttttgctcgatttgttcgtatgaaaggcttaacgaataagtacagtatcaacgtgagc
accaagaaaggaaaaatggttctcaaaattgaagagaatgatttaatcactgtcaatatg
ggtattcctgagttcgaaccgggcaagattccatttaaggcgaagcagccagaaaagacg
tatatcctaagaacggatgtacacaccttgttctgtggtgctgttagcatgggtaaccca
catgtggttaccgtggttgatgacgtcgataccgcagatgtggataccttaggtccactg
cttgaatctcatgaacgttttcctgaacgtgttaatgctggctttatgcaggtggttaac
cgtgaagaagtccgcttgcgtgtctatgaacgcggtgcgggtgaaactcaggcgtgtggt
agtggtgcatgtggcgcagttgccgttggtattactcaaggcttactggctgagaatgtg
aaggttcgtctacctggtggtgacttacacattagctggcaaggccctgggaaacctctg
tttatgactggtccagcaacgcatgtgtttgatggtcaactttcttgctaa

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