Vibrio syngnathi: K08M4_01080
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Entry
K08M4_01080 CDS
T09193
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsy03009
]
K08M4_01080 (rsmD)
Enzymes [BR:
vsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
K08M4_01080 (rsmD)
Ribosome biogenesis [BR:
vsy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K08M4_01080 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_37
Methyltransf_31
MethyltransfD12
Methyltransf_15
Methyltransf_4
Methyltr_RsmB-F
GidB
RrnaAD
TRM
TRM5-TYW2_MTfase
DNA_methylase
Methyltransf_12
SAM_MT
UPF0020
Methyltrans_SAM
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
ARP36944
UniProt:
A0AA34TLC9
LinkDB
All DBs
Position
1:complement(113944..114546)
Genome browser
AA seq
200 aa
AA seq
DB search
MVRRRQQNTSQKKPSGGFVRIISGSWRGRKLPVHDLEGLRPTIDRVKETLFNWVAQDIPH
STCLDVFAGSGGLGFEAASRQAKMVTLLEMNQKAAKQLSDNAKELKADNINVVNTDAISF
LKKPGTPYDMVFLDPPFRKGLLAETVQLLESNGWLADNAIIYVETEKELKLEAMPENWEL
HRDKTTGQSSYRLFNRITEE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaagacgtcgccagcaaaacacatcacaaaaaaagccatccggaggctttgttcga
attattagtggctcatggagaggtagaaaactgcctgttcatgatttagaagggttacgc
ccaaccattgaccgagtaaaagagacactctttaactgggtggctcaagatatcccacat
tcaacttgcttggatgtatttgccggttctggcggtctaggttttgaagcagcttctcgc
caagccaaaatggtgacactgctcgaaatgaatcaaaaggcggctaaacagctttctgat
aacgcgaaagagctcaaagcagacaacattaatgtggtaaatactgacgctatctctttc
cttaagaagccaggcactccttacgatatggtctttctcgatcctccatttcgtaaaggc
ttactcgcagaaacagtacaactgcttgagagcaacggttggcttgcagacaacgccatc
atttacgttgagacagagaaagagctaaaactcgaagctatgccagaaaactgggaatta
catcgcgataagaccactggccagtcgagctaccgactgttcaatcgaatcactgaagaa
tag
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integrated database retrieval system
