KEGG   Vibrio syngnathi: K08M4_01830
Entry
K08M4_01830       CDS       T09193                                 
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vsy  Vibrio syngnathi
Pathway
vsy03030  DNA replication
vsy03430  Mismatch repair
vsy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K08M4_01830 (polC_1)
   03430 Mismatch repair
    K08M4_01830 (polC_1)
   03440 Homologous recombination
    K08M4_01830 (polC_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vsy03032]
    K08M4_01830 (polC_1)
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_01830 (polC_1)
Enzymes [BR:vsy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K08M4_01830 (polC_1)
DNA replication proteins [BR:vsy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K08M4_01830 (polC_1)
DNA repair and recombination proteins [BR:vsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K08M4_01830 (polC_1)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: ARP37004
UniProt: A0AA34TLH7
LinkDB
Position
1:complement(195758..196390)
AA seq 210 aa
MNRLVRYYWHHKLKGSPYQPLFAAPVDHEYVSLDCETTSLDPNQAELVTIAATKIIGNRI
ITSQPFEVRLRAPQSLDCNSIKIHRIRHQDLKYGIEEKQALIELLNFIGNRPLVGYHIRY
DKKILDRACLKQLGFPLPNRLVEVSQLYQEKLERQLPNAYFDLSMDAICRQLDLPIPINK
HDALQDAISAALIFVRLKHGDLPRFNSSYS
NT seq 633 nt   +upstreamnt  +downstreamnt
atgaatagattggttcgttattactggcatcacaaactcaaaggctctccttatcagcct
ctgtttgcagcgcctgttgatcacgaatacgtatctcttgattgtgaaaccaccagcctc
gaccctaatcaggctgaattagtcactattgccgcgacaaagatcatcggtaaccgaatc
atcaccagccaaccttttgaagttcgactcagagcacctcaatcgctcgattgcaattcc
atcaaaatccaccgcattcgccaccaagatctaaagtacggtatagaagagaaacaagcc
ctaattgagctactgaacttcatcggaaatcgtcctttagtcggctatcacatccgctat
gataaaaaaatcctcgaccgcgcctgtttaaaacagcttggatttccactgcctaaccga
ttagtcgaagtgagccagctctaccaagaaaaactcgaaaggcagctgcccaatgcctac
ttcgatctcagtatggacgccatctgtcgccagctcgatttacccattcccatcaataaa
catgatgcattacaagatgctatctccgcggcgctgatctttgtacgcctaaaacatggc
gacctaccccgcttcaactcttcttactcttaa

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