Vibrio syngnathi: K08M4_03100
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Entry
K08M4_03100 CDS
T09193
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K08M4_03100 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsy03021
]
K08M4_03100 (rpoA)
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_03100 (rpoA)
Enzymes [BR:
vsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K08M4_03100 (rpoA)
Transcription machinery [BR:
vsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K08M4_03100 (rpoA)
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K08M4_03100 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ARP37131
UniProt:
A0AA34TLI2
LinkDB
All DBs
Position
1:326580..327572
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQINTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccgcgtcttgttgacattgaacagatcaat
acgacacacgcgaaagtaactcttgagccattagagcgcggtttcggccacactctaggt
aatgctcttcgccgcattcttctatcttctatgccgggttgtgccgtaacagaagttgaa
attgaaggtgtgctacacgaatacagcactaaagaaggcgttcaggaagatatcctggaa
atccttctaaaccttaaaggtttagctgtacgcgttgctgaaggcaaagatgaagtgttt
attacactgaacaaatcaggctcaggccctgttgttgcaggtgacatcacccacgatggt
gatgtagagatcgctaaccctgagcacgtaatttgtcacctaacggatgacaatgctgag
atcgctatgcgtatcaaagtagaacgtggtcgtggttacgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaatcggtcgtctacttgttgacgctacttacagcccg
gtcgataaaatcgcctacgctgtagaagcggcacgtgtagaacaacgtactgacttagac
aagcttgttatcgatatggaaacgaacggtactcttgaacctgaggaagcaatccgtcgt
gcagctactattttagctgaacaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatcctatcctactacgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtttgaaggcagaagcgattcactacatcggt
gatcttgtacagcgcactgaggttgagctacttaaaacgccaaaccttggtaagaaatct
cttacagagattaaagatgtgcttgcttcacgtggtctttctctaggcatgcgtctagaa
aactggccaccagcgtcaatcgctgaagattaa
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