Vibrio syngnathi: K08M4_05440
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Entry
K08M4_05440 CDS
T09193
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy02024
Quorum sensing
vsy03060
Protein export
vsy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K08M4_05440 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K08M4_05440 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K08M4_05440 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vsy02044
]
K08M4_05440 (ffh)
Enzymes [BR:
vsy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K08M4_05440 (ffh)
Secretion system [BR:
vsy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K08M4_05440 (ffh)
Eukaryotic Sec-SRP protein
K08M4_05440 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
KTI12
AAA_31
AAA_30
T2SSE
Mg_chelatase
AAA_33
AAA_24
APS_kinase
AAA_19
AAA_18
VirC1
AAA_14
Rad17
AAA_16
Helicase_RecD
ATP_bind_1
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ARP37329
UniProt:
A0AA34TM95
LinkDB
All DBs
Position
1:549860..551254
Genome browser
AA seq
464 aa
AA seq
DB search
MFDNLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKRVKEGAV
GVEVSKSLTPGQEFIKIVQAELEAVMGESNEALDLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLTERDKKKVLVVSADVYRPAAIKQLETLASDVGVDFFPSSADQKPLDIANAAIDHAK
KKFYDVLIVDTAGRLAIDEEMMGEIKELHTAIKPVETLFVVDAMTGQDAANTAKAFGDTL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQKNVDTEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMMDKLPGMSQL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPDLIKGSRKKRIAAGSGTQVQDVNRMLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGGGGMGGMGGGFNPFGR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaacggatcgtctatccaaaacgctgaagaacatcagcggtaaaggt
cgtctgaccgaagacaatattaaagagacactgcgtgaagtacgtatggcgctacttgaa
gccgacgttgcattgcccgttgtccgcgattttgttaagcgcgtaaaagaaggcgctgtg
ggtgtcgaggtttctaaatctctaacaccgggtcaagaattcattaagatcgtccaagct
gaacttgaagctgtgatgggggagtctaacgaggctcttgacctagcagcacaaccgcca
gctgttatcttaatggcgggtctacaaggtgcgggtaaaaccacatcggtaggtaagcta
tctaagctcctgactgagcgtgataagaagaaagttttggttgtgtctgccgacgtttac
cgtccagccgcgatcaaacagcttgaaaccttagcaagcgatgttggcgtcgacttcttc
ccatcttcagctgaccaaaagcctcttgatattgcaaacgctgcaatcgaccacgcgaag
aagaaattctacgacgtgctaattgtcgatactgccggtcgtttggctatcgatgaagag
atgatgggcgagatcaaagagcttcatactgccattaaaccagtagagacactgttcgtt
gttgatgcaatgacaggtcaagatgctgctaatactgcaaaagcctttggtgatacgcta
ccactaaccggtgttatcttaacgaaagttgatggtgatgcgcgtggtggtgctgcgctg
tctgttcgtcatatcacaggtaagccgattaaattcttaggtgttggtgaaaagactgac
gcactagaaccattccatccagatcgtgttgcttctcgtatcctaggtatgggcgacgta
ctgtctcttattgaagacctacagaaaaacgttgataccgagaaagcagagaagctggct
aagaagttcaaagagaagaaaggctttgaccttgaagacttccgtgagcagcttggtcag
atgaaaaacatgggcggcatgatgggcatgatggataagcttccaggcatgtctcagcta
ccagacaacgttaaagataaagttgatgacaagatgttcaagcaaatggaagcgatcatc
aactctatgacaatgaaagaacgtcagcgtccagacctaatcaaaggctcacgcaaaaag
cgtattgctgcaggttctggtacgcaggtacaagatgtaaaccgtatgcttaaacagttc
actcaaatgcagaagatgatgaagaaaatgcagaaaggtggaatgaaaggcatgatgcgc
aacatgcaaggcatgatgggcggcggtggaggtatgggcggaatgggtggtggttttaac
ccgtttggtcgataa
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