Vibrio syngnathi: K08M4_05940
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Entry
K08M4_05940 CDS
T09193
Symbol
dppB_1
Name
(GenBank) Dipeptide transport system permease protein DppB
KO
K02033
peptide/nickel transport system permease protein
Organism
vsy
Vibrio syngnathi
Pathway
vsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K08M4_05940 (dppB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsy02000
]
K08M4_05940 (dppB_1)
Transporters [BR:
vsy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K08M4_05940 (dppB_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Archaeal_AmoA
Motif
Other DBs
NCBI-ProteinID:
ARP37379
UniProt:
A0AA34TM90
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All DBs
Position
1:complement(611053..612039)
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AA seq
328 aa
AA seq
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MGYFLRRLSFYFVALLVAATLNFIIPRAMPGDPVTMMFANASVQVTPERIAAMKELLGFV
DGGLLVQYGAYMKNILSWELGTSIQFYPLSVNTLLGGAFGWSLFLAGTAVILSFSIGSIL
GIFAAWKRGSKYDAFVTPGMLILQAVPQVVIAMLALFTFAIGLKWFPTGYAYTAGTIPDW
TSWAFIKDVAYHAFLPLVCASVVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVF
NYAARNAMLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGSVLFNAINARDYQVLQGQLLI
MTLFMLFFNLVADMLYVVLDPRLRKGGK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggttattttttaagacgtttgtcattttattttgtcgcgctattagttgcagcgacg
ttaaactttattattccaagagcaatgcctggtgacccagttaccatgatgtttgcgaac
gcttctgtacaagttactcctgagcgtattgcggcaatgaaagaactattaggcttcgtt
gatggcggcttactggttcaatacggcgcatacatgaagaacattctaagctgggagctt
ggtacatcaattcaattctacccactttctgtaaatactctgttgggtggagcatttggt
tggtcgctattcttagcaggcaccgccgttattctttctttctctattggttcaatccta
ggtatttttgcagcgtggaaacgtggcagcaaatacgatgcctttgtgactccagggatg
ctgattttacaagccgttcctcaggttgttattgccatgcttgcgctgtttaccttcgca
attggtttgaagtggttcccaactggctacgcctataccgcaggtacaatacctgactgg
acaagttgggcattcatcaaagacgttgcttaccacgctttcttgcctctggtgtgtgct
tcggttgttcaaattggtggcttcctagtaaacatgcgtaacaacatgattaacctacta
gcagaagactacatcaccatggcgaaaggcaaaggcctgagcgaaaaccgagtggtattc
aactacgcagctcgtaacgcgatgctaccaagtgtgactgcactttctatgtcgctaggt
atggcaatcggtggtcagttaattatcgaaatcatctttaactacccaggtcttggcagc
gtacttttcaacgcaattaacgctcgtgattaccaagtactgcaaggtcaactgcttatc
atgacgctattcatgctgttctttaacctagttgcagacatgctttacgttgttcttgac
cctcgtcttcgtaagggtggtaaataa
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