Vibrio syngnathi: K08M4_05970
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Entry
K08M4_05970 CDS
T09193
Symbol
rsmC
Name
(GenBank) Ribosomal RNA small subunit methyltransferase C
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsy03009
]
K08M4_05970 (rsmC)
Enzymes [BR:
vsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
K08M4_05970 (rsmC)
Ribosome biogenesis [BR:
vsy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K08M4_05970 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
MTS_N
Methyltransf_25
Methyltransf_31
PrmA
Methyltransf_12
Methyltransf_23
Methyltransf_16
Cons_hypoth95
Methyltransf_11
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ARP37382
UniProt:
A0AA34TMC7
LinkDB
All DBs
Position
1:complement(618208..619230)
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AA seq
340 aa
AA seq
DB search
MSAYIAPSQIAQRQLAYFEGKHVLVAGEAEDLFPVELAKHCESVTVFTSNYSYYRQLEGC
NTIQRFYGAEFTEETKADLVMLYWPKAKAEAEFLLAMLFAKLGKDTEIVVVGENRSGVKS
IEKMFASYGKVVKYDSARRCSFYWGQCFEQPPAFNLQEWFKTYTVNIGEQSLTVKSLPGV
FSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVLGAVMASRHPDIELEMCDISAFAVASS
QATLEANGLTGNVFASDVYSDTSKDYQFIISNPPFHSGLDTSYSATETLLAEAPKHLKRS
GEMIIVANSFLKYIPIIEQAFGKCATLNKTTKFAIYHANK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttatattgccccaagccaaattgctcaacgccaactcgcctactttgaaggc
aaacatgttttagttgcaggtgaggcagaagacttattccctgttgaattagcgaaacat
tgtgaatcagtcaccgtatttacctctaattacagctactaccgtcaattagaaggctgc
aacaccatccaacgtttttatggtgcagagtttaccgaagaaaccaaagctgacttagtg
atgctgtactggccaaaggccaaagcggaagcggaatttctgttggcgatgttatttgcc
aagctaggtaaagataccgagattgtcgtagttggcgaaaatcgttctggtgttaaaagt
atcgaaaagatgttcgcttcttacggcaaagtcgtgaaatacgattcagcgcgtcgttgt
tctttctactggggtcaatgcttcgagcaaccaccagccttcaacctacaagagtggttt
aaaacctacacggttaacattggtgagcaatcacttacagtgaaaagccttccaggcgtg
tttagccacggtcaattcgatgttggtagccaacttctgttggataccctgccaaaacta
aaaggcaaagtactcgactttggctgtggtgcaggcgtattgggcgcggtaatggcatct
cgtcacccggatatcgagctagaaatgtgcgacatcagtgcatttgccgtagcatcaagc
caagctacgttagaagcgaacggtttaacggggaatgtcttcgcctcagatgtctactct
gatacatcaaaagattaccaattcatcatcagtaacccaccattccattctggtttggat
acaagctacagcgcgactgagaccttacttgcagaggctcctaaacacttgaagcgttct
ggtgagatgattattgttgcgaacagttttttaaaatacattccaattatcgagcaagct
tttggaaaatgcgcgactctaaataagaccaccaaattcgcgatctatcacgcaaacaaa
tag
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