Vibrio syngnathi: K08M4_06300
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Entry
K08M4_06300 CDS
T09193
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
K08M4_06300
Enzymes [BR:
vsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
K08M4_06300
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS_9
PAS
Motif
Other DBs
NCBI-ProteinID:
ARP37413
UniProt:
A0AA34XML0
LinkDB
All DBs
Position
1:complement(655949..658039)
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AA seq
696 aa
AA seq
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MFIDSEYSSSWRIGSTLMPPQQLQHWFTQLTANSPFFFAVLDAQHNYFMVNERYCDIAGL
SKTELVGMNDRQTLGEQFYQHLKPYYERAFNGETIEAEITLNETALDTSLHFSLSPLTNG
KKTEYIIFHAFDTSENQVLVRSLEESEAKFHKLSHLLPDGLLLVENDYILSSNPAAARLL
GFNSTTELIGEELGRLFIDEQTKTVFNNDLSSIISESGLVCLTGARCGFERKVQLNIDST
VILGSSTQLVLIQDAQETTKQYTPANSEDAYIDTLTKLYNRLGFTKSLEQFIHNKTPVVM
LYLDIDNFKNINDSLGHHIGDKVIKEVASRLKRQLPRQAIIGHLGGDEFGIILPEPEHPR
TPEILSEKIISLINQPFDLHHFSKRLACSIGSVSFPHDGSDARILLQNADTAMYEAKDRG
RNRLIKFNEQMNKEARMRLWLEIELQKALQQNGLEVWYQPKVNARDFTINGAEALVRWKH
PVEGYISPAAFIPVAERAGLIEQLGRVVMREVFATVKRWKMQGILPGRVAINLSPEQFGN
PKLIDFMEKLLRSTELDPSAITFELTESAVMSDSEHTLQMLNAIKRLGFALSIDDFGTGY
SSLSYLARFPIDELKIDRAFISDIDTLPKQITVIENIINLGKSLDLTVVAEGVETSEQAT
LLSNLNCGSIQGFHFYRPQPKQEVEELFAQNRRHKN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcgatagtgaatattcaagctcttggagaattggtagtactttgatgcctccc
cagcaactacaacattggtttacacagcttactgcaaacagcccgttcttttttgcggta
cttgatgctcaacataactattttatggtgaatgagcgttactgtgatattgctggttta
agtaaaacagagcttgtaggcatgaatgaccgccaaaccttgggcgagcaattctaccaa
caccttaagccttactatgagcgtgcattcaatggcgaaacaattgaggcggaaatcacc
ctaaacgaaacggctttagacactagccttcatttcagcctatctccgcttaccaatggt
aaaaagactgaatacatcatctttcacgccttcgatacatctgaaaaccaagtacttgtc
cgttctttagaagagtctgaagcgaaattccacaagctatctcacctgctcccagacgga
ttgctattagttgaaaacgactacattctgtcttcgaaccctgcagctgcgcgcttactt
ggttttaactccaccacagaattgattggcgaagagttaggccgattatttatcgatgaa
caaaccaaaacagtctttaataatgacctcagctccattatttctgagtctggcttggtt
tgtttaacgggtgctcgatgtggctttgaacgtaaagttcagttaaatatcgactcgacg
gtcattcttggaagcagtacccaactagtacttattcaagacgctcaagaaacaacaaaa
caatacacacccgctaacagtgaagatgcctacatcgatacactgactaagctctacaac
cgacttgggtttaccaaaagccttgagcagttcattcacaacaagacccctgttgtgatg
ctctacttagacatcgataacttcaaaaatatcaatgactcacttggccaccacatcggt
gataaagtgattaaagaggtcgcatctcgcttaaaacgacaactgcctcgtcaagctatt
attggccatttaggcggtgatgaatttggtattattctacctgagcctgaacacccacga
acacctgaaatactctctgaaaagatcatatctctgatcaaccaacccttcgatcttcac
cattttagcaagcgtttagcctgctcgattggtagtgtgagctttcctcacgatggcagt
gacgcacgtatcttgctacagaatgctgacaccgcaatgtatgaagctaaggatcgtgga
cgcaaccgcctgatcaagttcaacgaacagatgaacaaagaagcgcgaatgcgactgtgg
cttgagatagaactgcaaaaagcactgcaacagaacgggcttgaggtttggtaccaacca
aaagtaaatgcgcgtgacttcaccattaacggagcagaagctctggtacgttggaagcac
cctgtagaaggttatattagccctgccgcatttattccagtagcggaacgtgctggcctt
attgaacaacttggtcgtgtggtaatgcgcgaagtatttgccacggtgaaacgttggaag
atgcaaggtattttacctggtcgcgtcgcgatcaacctttcaccagagcagtttggtaat
ccaaaattgattgatttcatggagaagttgctgcgttctactgagctagatccaagtgcg
attacctttgagcttacagaaagtgccgtaatgagtgatagtgagcacacgcttcaaatg
ctgaacgcgattaagagacttggctttgcgttatccatcgatgactttggtacgggttac
tcttctctatcttaccttgctcgctttccgattgatgagcttaaaattgaccgggctttt
atctcagatatcgataccttaccaaagcaaattaccgtaattgaaaacatcatcaacctt
gggaaatctctcgatttaaccgtggttgcagagggtgtcgaaaccagtgaacaagcaacc
ctgctgtctaacctcaactgtggttcaattcaaggtttccacttctatcgccctcaacca
aaacaagaggttgaagaactgttcgcccaaaaccgtcgtcacaagaattaa
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