KEGG   Vibrio syngnathi: K08M4_06490
Entry
K08M4_06490       CDS       T09193                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
vsy  Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_06490
DNA repair and recombination proteins [BR:vsy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     K08M4_06490
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C Lon_C SLFN-g3_helicase GvpD_P-loop AAA_22 AAA RecA Rad51 AAA_14 ABC_tran AAA_16 NTPase_1 nSTAND3 Zeta_toxin Viral_helicase1 Zn_ribbon_Thio2 AAA_24 AAA_29 AAA_5 DUF7125 Zn_ribbon_8 cobW zinc_ribbon_6
Other DBs
NCBI-ProteinID: ARP37432
UniProt: A0AA34XMN7
LinkDB
Position
1:677162..678541
AA seq 459 aa
MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLSGYAGGATES
SVQTLSEIDLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCQLSS
QLPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEREQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFLVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKRAIVPAANMPKGGIPGMQIHGVKKLSEAINAFDEL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggctaaggcaaagcgagcttatgtgtgtaatgactgtggtgctgactttccacgttgg
caagggcagtgcaatgcatgtggtgcttggaacacgattacagaagttaggttagccgct
tcacctcaggtcgcgcgtaacgaacgactcagtggttacgctggtggtgcaactgaatct
tcggttcaaacgctatcggaaatcgacttgcaagaggtcccgcgctttagtagtggcttc
aaagagcttgatcgtgtacttggtggtggtgttgtacctggcgctgcgattcttattggt
ggtaaccctggtgccggtaaatcaacgctgttgttgcagactatgtgtcagctttcttcc
cagttaccgacactttatgtcactggcgaagaatctcttcaacaagttgcgatgcgagca
tctcgattagggttaccaaaagagcatctcaaaatgctctctgaaaccaatgttgataaa
atctgtcaggttgcagaaagagagcagcctaagatcatggttatcgattcaatccaagtt
atgcatgtcgctgatgttcaatcgtctccaggcagtgttgctcaggtgcgcgaatcggca
accgcattaacgcgctatgcgaaacagaacaacgttgccgtattcctagtgggacacgta
actaaagacggtaccttagcgggaccaaaagtacttgaacacattattgactgctcggtg
ctgttagatggcggaacggacagtcgttttagaaccttgcgcagccacaagaaccgtttt
ggtgcagtgaatgagctaggtgtgtttgccatgacagggcaagggctaaaagaagttagc
aatccatcggctattttcctgtctcgtggtgaagaagaaacctcaggcagttcagtgatg
gtggtttgggaagggacgcgtccacttcttgtcgaaattcaagcgctggtggattattcg
cagctggctaacccgcgtcgtgtcgctgttggtctcgagcaaaatcgactgtcattgtta
ttagccgtgctgcataaacacggcggcttacaaatggctgaccaagatgtgtttgtgaat
gtcgttggtggtgttaaagtaaccgaaaccagtgctgatcttgcattggtaatggcatta
ctttcgagtttcagagaccgcgcattgccaaaagatgtggtggtttttggcgaagtaggc
cttgctggtgagattcgacctgtaccgagcggtcaagagcgcttaaatgaggcgtttaaa
cacggcttcaagagagccattgtaccagcggctaacatgcctaaaggtggcattccagga
atgcagatccacggtgtgaaaaaattatcggaagcaattaatgcttttgatgagttgtaa

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