Vibrio syngnathi: K08M4_06490
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Entry
K08M4_06490 CDS
T09193
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_06490
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K08M4_06490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
SLFN-g3_helicase
GvpD_P-loop
AAA_22
AAA
RecA
Rad51
AAA_14
ABC_tran
AAA_16
NTPase_1
nSTAND3
Zeta_toxin
Viral_helicase1
Zn_ribbon_Thio2
AAA_24
AAA_29
AAA_5
DUF7125
Zn_ribbon_8
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ARP37432
UniProt:
A0AA34XMN7
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All DBs
Position
1:677162..678541
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLSGYAGGATES
SVQTLSEIDLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCQLSS
QLPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEREQPKIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFLVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKRAIVPAANMPKGGIPGMQIHGVKKLSEAINAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaagcgagcttatgtgtgtaatgactgtggtgctgactttccacgttgg
caagggcagtgcaatgcatgtggtgcttggaacacgattacagaagttaggttagccgct
tcacctcaggtcgcgcgtaacgaacgactcagtggttacgctggtggtgcaactgaatct
tcggttcaaacgctatcggaaatcgacttgcaagaggtcccgcgctttagtagtggcttc
aaagagcttgatcgtgtacttggtggtggtgttgtacctggcgctgcgattcttattggt
ggtaaccctggtgccggtaaatcaacgctgttgttgcagactatgtgtcagctttcttcc
cagttaccgacactttatgtcactggcgaagaatctcttcaacaagttgcgatgcgagca
tctcgattagggttaccaaaagagcatctcaaaatgctctctgaaaccaatgttgataaa
atctgtcaggttgcagaaagagagcagcctaagatcatggttatcgattcaatccaagtt
atgcatgtcgctgatgttcaatcgtctccaggcagtgttgctcaggtgcgcgaatcggca
accgcattaacgcgctatgcgaaacagaacaacgttgccgtattcctagtgggacacgta
actaaagacggtaccttagcgggaccaaaagtacttgaacacattattgactgctcggtg
ctgttagatggcggaacggacagtcgttttagaaccttgcgcagccacaagaaccgtttt
ggtgcagtgaatgagctaggtgtgtttgccatgacagggcaagggctaaaagaagttagc
aatccatcggctattttcctgtctcgtggtgaagaagaaacctcaggcagttcagtgatg
gtggtttgggaagggacgcgtccacttcttgtcgaaattcaagcgctggtggattattcg
cagctggctaacccgcgtcgtgtcgctgttggtctcgagcaaaatcgactgtcattgtta
ttagccgtgctgcataaacacggcggcttacaaatggctgaccaagatgtgtttgtgaat
gtcgttggtggtgttaaagtaaccgaaaccagtgctgatcttgcattggtaatggcatta
ctttcgagtttcagagaccgcgcattgccaaaagatgtggtggtttttggcgaagtaggc
cttgctggtgagattcgacctgtaccgagcggtcaagagcgcttaaatgaggcgtttaaa
cacggcttcaagagagccattgtaccagcggctaacatgcctaaaggtggcattccagga
atgcagatccacggtgtgaaaaaattatcggaagcaattaatgcttttgatgagttgtaa
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