Vibrio syngnathi: K08M4_07310
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Entry
K08M4_07310 CDS
T09193
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsy03016
]
K08M4_07310 (miaB)
Enzymes [BR:
vsy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
K08M4_07310 (miaB)
Transfer RNA biogenesis [BR:
vsy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
K08M4_07310 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ARP37514
UniProt:
A0AA34TMH7
LinkDB
All DBs
Position
1:complement(763473..764897)
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEVPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKEGVVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPEMIKSSLS
NEKPVMDISFPEIEKFDNLPEPKADGATAYVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLYEVAQLAEQGVREVNLLGQNVNAFRGPTYEGDICTFAELLRLVASIDGIDRIRFTTSH
PLEFGDDIIEVYKDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGESKQDFQDTMKLIKEVDFDMSFSFVFSPRPGTPAADYPCDVPAQEKKD
RLWELQQTVNTQAMRFSRLMLGTEQRILVEGPSRKNLMELRGRTENSRVVNFEGSADLIG
QFVDVKITEVYTNSLRGELVRTEKDMGLRVVMTPAEMMEKTKREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacttggggctgtcagatgaatgaatatgattcatca
aaaatggccgacctgcttaacgctgcaaatggctatgagctaactgaagtacctgaggaa
gcagacgtactactattgaatacttgttctatccgcgaaaaagcgcaagaaaaagtattc
caccagcttggtcgttggaaaacgcttaaagataaaaaagaaggtgtggtgatcggtgtg
ggtggctgtgtagcgactcaagaaggtgaccacattcgtcaacgtgcaccttacgtagac
gtaatctttggcccacaaacattacaccgtttgccagagatgattaagtcatcactgtct
aacgaaaagccagtaatggacatctctttccctgagatcgaaaaattcgataacctgcca
gagccaaaagcagacggcgcaacggcgtacgtttctatcatggaaggttgttctaagtac
tgcacttactgtgttgtgccatatactcgtggtgaagaagttagccgtccaatggatgat
gtcctctacgaagttgcacaacttgcagagcaaggcgttcgtgaagttaacctactaggc
caaaacgtaaacgcattccgtggccctacttacgaaggcgacatctgcacatttgcagaa
ctacttcgcctagttgcgtctatcgatggtatcgaccgtattcgtttcactacaagccac
ccgcttgaatttggtgatgacatcattgaagtttacaaagacacacctgaactcgtgagc
ttcttacacttgcctgtacaaagtggtagtgaccgtattcttacgatgatgaaacgcccg
catacggcaatcgaatacaaatcaattatccgtaaactgcgtaaagctcgtcctgatatt
caaatcagctctgactttattgttggtttccctggtgagtctaagcaagacttccaagat
acaatgaagctaatcaaagaagttgatttcgatatgagcttcagctttgttttctctcct
cgtccaggtacacctgctgctgattacccatgtgatgtaccagcacaagagaagaaagat
cgcctgtgggaactgcaacagacagtaaacacacaagctatgcgtttctctcgcctaatg
ctaggcacagagcagcgtatccttgttgaaggtccatcaagaaagaatctaatggagctt
cgtggtcgtactgaaaacagccgtgttgtgaacttcgaaggttctgctgatcttatcggt
caattcgtagatgtgaagatcactgaggtttacaccaactcactacgtggtgaattagtt
cgcacagaaaaagacatgggtctacgcgttgtaatgactccagcagaaatgatggaaaaa
acaaaacgtgaagacgagctaggtgtagcgacatttacgccatag
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