Vibrio syngnathi: K08M4_08240
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Entry
K08M4_08240 CDS
T09193
Symbol
ntrC
Name
(GenBank) Nitrogen assimilation regulatory protein
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vsy
Vibrio syngnathi
Pathway
vsy02020
Two-component system
vsy02040
Flagellar assembly
vsy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K08M4_08240 (ntrC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
K08M4_08240 (ntrC)
09142 Cell motility
02040 Flagellar assembly
K08M4_08240 (ntrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsy03000
]
K08M4_08240 (ntrC)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vsy02035
]
K08M4_08240 (ntrC)
Transcription factors [BR:
vsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
K08M4_08240 (ntrC)
Bacterial motility proteins [BR:
vsy02035
]
Flagellar system
Flagellar assembly proteins
Others
K08M4_08240 (ntrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
Mg_chelatase
AAA
AAA_7
MCM
Motif
Other DBs
NCBI-ProteinID:
ARP37587
UniProt:
A0AA34XMP8
LinkDB
All DBs
Position
1:843237..844700
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AA seq
487 aa
AA seq
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MQGLAKLLVVDDNAQNRHNLSTILEFVGESCEVISSEQAHTVDWSLQWAGCIIGSIKAKG
FALLNEKLVHVNHIPLLVIGKNDYPVEELTNFVGELELPLNYPQLSDALRHCKEFLGRKG
VQILPSARKNTLFRSLVGQSVSIQEVRHLIEQVSSTEANVLILGESGTGKEVVARNVHYH
SKRRSGPFVPVNCGAIPPDLLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGDM
PMAMQVKLLRVLQERCFERVGGNSTIQADVRVIAATHRNLESMIEDDLFREDLYYRLNVF
PIEMPSLQDRKEDVPLLLQELMTRMEAEGGMPICFTPRAINSLMEHCWPGNVRELANLVE
RMVILYPNSLVDVNHLPTKYRYSDIPEFQPEFNNFASEEEQERDALSDLFSEDFSFEQHD
ELADNANAPQDLPAEGVNLKELLADMEVNMINQALEAQGGIVARAADMLGMRRTTLVEKM
RKYNLQR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaaactgcttgtcgtcgatgataacgctcaaaatcgtcacaattta
agcacaatattagagtttgtaggagagagctgcgaagtaatcagctctgaacaagcacac
acagtcgactggtctctacagtgggctggttgcatcattggttcaattaaagccaaaggc
ttcgcattactgaatgaaaagcttgttcacgttaatcacatcccattactggtgattggc
aaaaacgattacccggtagaggagctcactaactttgttggtgaacttgaacttcctctt
aactacccgcaattaagtgatgcattaaggcactgtaaagaattcttgggccgcaaaggg
gttcaaattctaccttcggcacgcaagaacacattgtttcgtagcctcgttgggcaaagt
gttagcatccaagaagttcgtcacctgattgaacaagtctcgtctactgaagctaacgta
ctgattcttggcgagtcaggaacgggcaaagaagttgtagcacgtaatgttcactatcat
tctaaacgtcgttctgggcctttcgtacccgtaaattgtggcgctatcccgccagacttg
ctcgaaagtgaattgtttggtcatgagaagggcgcgtttactggtgcaattaccgcacgt
aagggccgttttgaattagctgaaggtggcacgctgtttcttgatgaaattggtgatatg
ccaatggcgatgcaagttaaattgctccgtgttttacaagagcgctgttttgagcgtgta
ggtggcaatagcactattcaagctgatgttcgagtgattgctgcaacacaccgcaatctt
gaaagcatgattgaagacgatttattccgcgaagatctttactaccgcttgaatgtcttc
ccaattgaaatgccatcgcttcaagacagaaaagaagatgttcctctattgctgcaggag
ctgatgaccagaatggaagctgaaggtggcatgccaatctgttttactcctcgcgcaatc
aattctttaatggagcattgctggccgggcaacgttcgcgaattagctaatttggttgag
cgaatggttattctgtatccaaatagcttggttgatgtgaatcatcttccaactaaatat
agatacagtgatatccctgagttccaacctgagtttaataattttgcatccgaggaagag
caagagcgagatgctctttctgacttgttctcggaagacttcagttttgagcagcacgat
gagcttgctgacaatgcgaatgcacctcaagatttacccgctgaaggggttaatttgaaa
gagctgctcgctgatatggaagtgaatatgatcaatcaagcgttggaggctcagggtggt
attgttgctcgcgctgctgacatgcttggaatgcgcagaaccactctggttgaaaaaatg
cgtaaatataacttgcagcgttag
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