KEGG   Vibrio syngnathi: K08M4_10580
Entry
K08M4_10580       CDS       T09193                                 
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
vsy  Vibrio syngnathi
Pathway
vsy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K08M4_10580 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_10580 (xthA)
Enzymes [BR:vsy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     K08M4_10580 (xthA)
DNA repair and recombination proteins [BR:vsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     K08M4_10580 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3 FTSW_RODA_SPOVE
Other DBs
NCBI-ProteinID: ARP37817
UniProt: A0AA34TN68
LinkDB
Position
1:complement(1107308..1108114)
AA seq 268 aa
MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK
AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDDNGEKVTVLNGYFPQGDNIKHE
TKYPYKRQFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF
QPEEREWLKTLMDWGFVDSFRLLHPEVSDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD
KCTEAGIDYELRGIEKPSDHAPIWSTFK
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaaagtaatcagcttcaacatcaatggccttagagcccgccttcaccaactgcaagct
attatcgataagcaccaacctgatgtgattggcctacaagagatcaaagtgcacgatgaa
gccttcccactagctgatgttgaagctatgggttacaaggtctacttccatggccaaaag
gcgcactacggtgtggctatgctttgtaagcaagagccaatttctgtacagaaaggcttt
cctacagacaatgaagatcatcaaaagcgtatgatcatggcgacgtttgaagatgacaac
ggtgaaaaggtcactgtgctaaatggttacttccctcaaggggacaacattaagcatgaa
actaaatacccgtataagcgtcagttctacaaggacttaatgacgtacctaaacgattac
cacaacaaagatgaacaagtaatcgtaatgggcgacattaatatcagccctaccgatatt
gatatcggtattggtgaacctaacgcgaaacgttggttaaaaacaggtaagtgttctttc
caaccagaagagcgcgaatggttaaaaacactgatggattggggctttgtggatagcttc
cgtttactgcaccctgaagtgagcgatcaatactcgtggtttgattaccgctcaaaaggt
ttcgtggacaaccgcggcttacgcattgacgtggtactggcgactcagaaacttgctgat
aagtgtactgaagcaggcatcgactacgagctacgcggcattgaaaaaccgtcagatcac
gctccgatttggtcaacgtttaagtag

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