KEGG   Vibrio syngnathi: K08M4_13880
Entry
K08M4_13880       CDS       T09193                                 
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
vsy  Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_13880 (sbcD)
DNA repair and recombination proteins [BR:vsy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     K08M4_13880 (sbcD)
    Archaeal homologous recombinant proteins
     K08M4_13880 (sbcD)
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2 DUF6761
Other DBs
NCBI-ProteinID: ARP38143
UniProt: A0AA34TPE7
LinkDB
Position
1:1496753..1498006
AA seq 417 aa
MKILHTSDWHLGQNFYNKSRKNEHEQFLQWLLEQVTEHDIDAIIVAGDIFDTSTPPSYAR
EMYNKFVVDSNKIGCQLVLLGGNHDSVSVLKETQQLLKYMGADVIPNTNEDHATQVVELK
GKNGDVEALVCAIPFIRPRDVLTSQAGVTGVERQKQLGDAIKQHYQSVYDAAVEKRATFE
NSEHMPIIATGHLTAMGVQQSDSVRDIYVGNLDGFAADGFPDADYIALGHIHRPQVVAKR
EYIRYCGSPIPLSFDELKSQKQVCVVEFIEGERTISQLPVPTFQPLAEIKGDLSEIESQL
NQYIGLDSDQSVWLSIEVQAQDYLSDLQERMRALTEGLNVEVLQLRRARERRNQALEQES
AETLSELSPMDVFTKRIALEEFETDSEKARLERMTVKFKQVMVEVSESAQAPNKVEE
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgaagattcttcacacgtcagattggcaccttggccaaaacttctacaataaaagccgt
aagaatgaacatgaacagttcttacaatggttacttgagcaagttacagagcacgacatc
gacgcgatcattgttgctggcgacattttcgataccagcacaccgccgagttacgctcgt
gagatgtataacaagttcgtggtcgattcgaacaagatcggctgccaattggtgttatta
ggtggaaatcacgattccgtttctgtattaaaagagacacaacagctgctcaaatacatg
ggcgcagacgtaattcctaataccaatgaagatcatgcgactcaggttgtcgaactaaaa
ggcaagaacggcgatgtagaagcgctggtttgtgccattccttttattcgccctcgcgat
gtattgactagtcaggcgggtgtcactggcgttgagcgtcagaagcagcttggcgatgca
atcaaacagcactaccaaagtgtttatgatgccgctgtagaaaaacgtgcgacgtttgaa
aacagtgagcacatgccgattatcgctacgggtcatttaacggcgatgggcgttcaacaa
tcggattcggtacgcgacatctatgttggtaaccttgatggttttgccgctgatggcttc
ccagacgcagattatattgcacttggtcatatccaccgcccacaagtggtagcaaagcgt
gaatacattcgttactgcggctcaccaattccattaagctttgatgaacttaaatctcaa
aagcaggtatgtgtggttgagtttattgagggcgagcgcaccatttctcaattgccagtt
ccaacgttccaacccctagctgaaatcaaaggcgacttgagcgagatcgaatctcaactg
aatcaatatataggcttagatagcgaccaaagcgtgtggttatcgatagaagtgcaagcg
caagattacttgtcggatcttcaagaacgtatgcgcgcactaaccgaaggtttgaatgtg
gaagtgcttcaattgcgccgcgcaagagaacgccgtaaccaagctttagagcaagagtcg
gcagaaacactgtcagaattgagcccgatggacgtgtttacgaagcgtattgccttagaa
gaatttgaaaccgattctgaaaaagcgcgtttagagcgcatgacggtgaagtttaaacaa
gtgatggttgaagtgtctgagagcgctcaagcgccaaacaaagtagaagagtaa

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