Vibrio syngnathi: K08M4_13940
Help
Entry
K08M4_13940 CDS
T09193
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_13940
Enzymes [BR:
vsy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
K08M4_13940
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
K08M4_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
Motif
Other DBs
NCBI-ProteinID:
ARP38149
UniProt:
A0AA34XNH5
LinkDB
All DBs
Position
1:complement(1504830..1506389)
Genome browser
AA seq
519 aa
AA seq
DB search
MNFKTVRLILGDQLNIQHSWFQQVDDDVIYIIAELKQETDYVASHIQKVAAFFSAMDYFA
DELKQQGHQVLHLTLDDTTQFENLDALLQHYVHEFGAQKFEYQRPDEYRLLEQMNKLKLT
NTTKGCCDTEHFLFPFDEIETQFPKDKHIMMEHFYRRMRKRFDILLEDGKPVGGKWNYDA
SNRKKLKKQDIESLPQPLMFANDISAILERIERHQVKTIGEVGDQLLWPVNRAQSLSLLA
HFCQVCLPLFGQFQDAMTTEHDSKWSLYHSRLSFSLNSKLLNPNEVIDAALSTYQASSSH
EKPTIDIAQVEGFVRQILGWREYIRAVYWANMPAYANKNHYSATNKLPHYFWDGQTKMNC
MKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQVDSWYLGIYVDAIEWVEMPNTRGM
ALFADGGIVGTKPYSASGSYINRMSDYCKGCHYQIKERSGDSSCPYNSLYWRFMNQHRDA
LNRNPRMGMLYRSWDNMAEQDQQAILDTAEQRITNLENL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaactttaaaaccgtgcgccttatcttaggcgaccaactcaatatccagcactcttgg
tttcaacaagttgatgacgacgtcatttatatcattgccgaacttaagcaggagactgac
tacgttgcatcgcacatccaaaaggtggctgcttttttctctgcgatggactactttgcc
gacgagctcaaacaacaaggtcatcaggtactccacctcactctggatgacacgactcaa
tttgaaaatctcgatgctctgttgcaacactacgtacacgaattcggcgcacagaaattc
gaatatcaaaggccagatgaatatcgccttttagagcagatgaacaagctaaagctcact
aatacgaccaaaggttgttgtgatacggaacacttcctttttccgtttgacgagattgaa
acccagtttcctaaagacaaacacatcatgatggaacacttctatcgccgaatgagaaag
cgcttcgacattttgctagaagacggaaagccagttggcggcaaatggaattacgatgcg
agcaatcgaaagaaactcaagaaacaagacattgaaagcctgcctcaacctctgatgttt
gccaacgacatttccgcgattttagaacgcatcgaacgtcatcaagttaaaaccattggt
gaagttggcgaccaattattatggccagttaaccgcgcacaaagcttgtctttactcgcg
cacttctgccaagtttgcttaccgttatttgggcagtttcaagatgcgatgactacagag
cacgactctaaatggagcttgtatcatagccgtctctccttttcgttgaacagtaaactg
ctgaaccctaacgaagtgattgatgctgcactgtcgacctatcaagcatccagttctcac
gaaaaaccaactatcgatattgctcaagtcgaagggttcgtgcgccaaattctaggttgg
agagagtacatacgcgccgtctattgggcaaacatgcctgcgtacgccaataaaaaccat
tattcagcaaccaataagctgcctcattacttttgggacggacaaaccaaaatgaattgc
atgaagcacgcgattgaccagtcccttgagtttgcttacgcgcatcacatccaaagatta
atgatcaccggcaacttctgcttaattacgggcatagaccccgaccaagtcgatagttgg
taccttggtatttacgtcgacgcgattgagtgggtcgaaatgccaaatacgcgaggtatg
gcactgtttgcggatggcgggatcgtcggaaccaaaccatactctgccagcggttcttac
attaatcgcatgagcgactactgcaaaggctgtcattaccaaattaaagaacgcagtggc
gatagttcttgtccatacaacagcttgtattggcgcttcatgaaccaacaccgcgatgcg
ttaaaccgtaacccacgcatgggcatgttatatcgctcttgggacaatatggccgagcaa
gatcaacaagcgattctcgataccgctgaacaacgaatcacaaacttggagaacttataa
DBGET
integrated database retrieval system
