Vibrio syngnathi: K08M4_17210
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Entry
K08M4_17210 CDS
T09193
Symbol
polC_3
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy03030
DNA replication
vsy03430
Mismatch repair
vsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K08M4_17210 (polC_3)
03430 Mismatch repair
K08M4_17210 (polC_3)
03440 Homologous recombination
K08M4_17210 (polC_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsy03032
]
K08M4_17210 (polC_3)
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_17210 (polC_3)
Enzymes [BR:
vsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K08M4_17210 (polC_3)
DNA replication proteins [BR:
vsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K08M4_17210 (polC_3)
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K08M4_17210 (polC_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ARP38476
UniProt:
A0AA34XNN8
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All DBs
Position
1:1881763..1882479
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AA seq
238 aa
AA seq
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MNKLFRSPAVDWPFKFAQKLERARDERLKQFYSQPLPSPDTPVSEIKFLAVDFETTGLNP
NKDGIITIGLVPFTLNRIYLRQARHWTLRPKQKLEEDSVVIHGITHNDIIDAPDLSEVLD
EILESMAGHIPVVHYRRIERDFLDNALKVRLGEGIEFPVLDTLEIESQIQNKLAGGLWNK
LKGKKPASVRLGQSRRRYHLPDYTPHHALTDAIATAELLQAQIAHHFSPDMPVKDFWL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactattcagatcacccgcggtcgattggccatttaagtttgctcagaagctg
gaacgagcgagagacgagcgcttaaagcaattttatagccagcctcttccttctcctgat
actccagtgtcagaaataaagttcttggcggtagactttgaaacaaccggtttaaaccca
aacaaagatggcatcattaccatcgggctagttccgtttacgctcaatcgaatctacttg
cggcaggctagacactggacattaaggccaaaacagaaattggaagaagattcagtggtc
attcatggtatcactcataacgacatcattgacgcgccagacttgagtgaagtattagat
gagattttagaatcaatggcggggcatatcccagtcgttcattatcgccgtatcgagcgt
gatttcttggacaacgcactgaaagtgagattaggtgaagggattgagtttccagtcctc
gatacgctcgagatcgaatctcaaatccagaacaaactggctggcggattatggaataag
ctaaagggcaagaagcctgcgtcagtgagattagggcagagccgccgtcgataccactta
cccgactacacgccgcatcatgcattaacggatgcaattgcgacagcggagcttctgcaa
gcacagattgcgcaccattttagccctgatatgccggttaaagatttctggttatag
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