Vibrio syngnathi: K08M4_19380
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Entry
K08M4_19380 CDS
T09193
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vsy03036
]
K08M4_19380
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_19380
Chromosome and associated proteins [BR:
vsy03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
K08M4_19380
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K08M4_19380
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Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
CUX1_N
TRCF
GemA
Motif
Other DBs
NCBI-ProteinID:
ARP38678
UniProt:
A0AA34TR47
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All DBs
Position
1:2111797..2112207
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AA seq
136 aa
AA seq
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MSELTKTLLNIRSLRAFSRELTLEQLEEALDKLTIVVQERQESEAEERAAKAEQEAKLSA
IAEQIAKDGIDVADLIAALSGEAKSKTTKSKRAPRPAKYKYVDANGDEKTWTGQGRTPSA
IQEQLDAGKSLEEFAL
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattaacaaaaactctattaaatatccgtagccttcgtgcgttctcacgtgaa
ttaactcttgagcaacttgaagaagcgctagacaagctgactattgttgtacaagaacgt
caagagtctgaagctgaagaacgcgcagcaaaagcagagcaagaagctaagctttctgct
atcgcagaacaaattgcaaaagacggaatcgatgttgccgatcttattgctgcactttct
ggtgaagcaaaatctaaaacaacaaaatctaaacgtgctcctcgccctgcgaaatacaaa
tacgtagacgcgaatggcgacgaaaaaacttggacaggtcaaggccgtacgccttcagct
atccaagaacaactagatgctggtaaatctctagaagagtttgctctttaa
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