Vibrio syngnathi: K08M4_19520
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Entry
K08M4_19520 CDS
T09193
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K08M4_19520 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsy01007
]
K08M4_19520 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsy03016
]
K08M4_19520 (serS)
Enzymes [BR:
vsy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
K08M4_19520 (serS)
Amino acid related enzymes [BR:
vsy01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
K08M4_19520 (serS)
Transfer RNA biogenesis [BR:
vsy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
K08M4_19520 (serS)
Prokaryotic type
K08M4_19520 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
PCRF
ERM_helical
FapA
DUF2203
YscO-like
Motif
Other DBs
NCBI-ProteinID:
ARP38692
UniProt:
A0AA34XNW6
LinkDB
All DBs
Position
1:complement(2126755..2128062)
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AA seq
435 aa
AA seq
DB search
MLDSKLLRAELDETAAKLARRGFTLDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQ
AKAKGDHEEAERILAEVGNLGAELDQAKVTLAELQSELETITMSIPNLPDAEVPDGKDED
DNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKISGSRFIVMKGKFARLHRAIAQ
FMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI
PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TKPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSAKTYDLEVWVPAQETYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQEADGRIAI
PTVLQPYMGGVTHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgagctgagctggatgaaacagcggcaaaattagcacgt
cgaggcttcacccttgatgtagagacaattcgtgaacttgaagaaaaacgtaagtccctt
cagatgaaaactgaagagctgcaagcgttacgtaactctcgatcgaagtccattggtcaa
gcgaaagcaaaaggcgaccatgaagaagctgagcgtatccttgctgaagtaggcaactta
ggcgcagaactagaccaagctaaagtaacattggctgagcttcaatctgagctagaaacg
atcaccatgtcaattcctaacttacctgatgcagaagtgccagacggtaaagatgaagac
gacaacgtagaagtttctcgttggggtcaacctaagacttacgacttcgaagtgaaagat
cacgtagatcttggcgaaatgtctggcggtcttgattttgctagcgcagttaaaatctcg
ggttctcgtttcatcgtgatgaaaggcaaatttgcacgtctacaccgtgctattgctcag
ttcatgctggatcttcacactgatgagcacggctacacagaaatgtacgtaccgtaccta
gtgaaccacgatagcctatacggtactggtcaacttcctaagttcggcgaagacttgttc
cacacaagcccgctaactgaacaagtaagtgacgtacctcttaagactctatcgcttatc
cctacggcagaagtaccggtaacgaacatggttcgtgacacgattactgatgaagctgaa
ctgccacttaagatgacagctcacacgccatgtttccgctctgaagcgggttcttacggt
cgtgacactcgtggtcttatccgtatgcaccaattcgacaaagttgagctagtacaaatc
actaagccagaagactcaatggcagcgcttgaagagctaacaggtcatgctgagaaagta
cttcaacttctagagcttccttaccgtaaagtgattctatgtacaggtgacatgggcttc
ggttctgcgaaaacttacgacttagaagtatgggttccagcacaagagacttaccgtgaa
atctcttcttgttcaaacatgtgggatttccaagcgcgtcgtatgcaagctcgtttccgt
cgtaaaggcgagaagaaacctgaacttgtacacactctaaacggttctggtcttgctgtt
ggtcgtactatggttgctattcttgagaacaaccaagaagcagatggccgtattgctatc
ccaacagtacttcaaccatacatgggcggcgtaacgcacattggttaa
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