Vibrio syngnathi: K08M4_19650
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Entry
K08M4_19650 CDS
T09193
Name
(GenBank) DNA-binding protein HU-beta
KO
K05788
integration host factor subunit beta
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsy03032
]
K08M4_19650
03036 Chromosome and associated proteins [BR:
vsy03036
]
K08M4_19650
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_19650
DNA replication proteins [BR:
vsy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K08M4_19650
Chromosome and associated proteins [BR:
vsy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K08M4_19650
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K08M4_19650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Glycos_trans_3N
HAAS
HU-CCDC81_euk_1
DUF4777
HU-DNA_bdg
Coagulin
Motif
Other DBs
NCBI-ProteinID:
ARP38705
UniProt:
A0AA34TPP6
LinkDB
All DBs
Position
1:complement(2142393..2142677)
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AA seq
94 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKDILEHMASTLESGDRIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNSGL
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaattgattgaaagactgtgcgctgagcaaacgcatctttctgcaaaa
gaaattgaagacgctgtaaaagacattttagagcacatggcttcaacactagaaagtggt
gatcgaatcgaaattcgcggctttggcagcttttctctgcattaccgtgaacctcgtgtt
ggacgtaatcctaaaactggtgacaaggttgagttggaaggtaaatacgttcctcacttc
aaaccaggtaaagagctacgcgagcgagtaaactcagggttgtag
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