Vibrio syngnathi: K08M4_19680
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Entry
K08M4_19680 CDS
T09193
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00541
Biosynthesis of various nucleotide sugars
vsy01100
Metabolic pathways
vsy01250
Biosynthesis of nucleotide sugars
Module
vsy_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K08M4_19680 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
K08M4_19680 (kdsB)
Enzymes [BR:
vsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
K08M4_19680 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
Lipid A
K08M4_19680 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
DUF2064
Motif
Other DBs
NCBI-ProteinID:
ARP38708
UniProt:
A0AA34TR55
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Position
1:complement(2145535..2146281)
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AA seq
248 aa
AA seq
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MSYTVVIPARYQSSRLPGKPLADIGGKPMIQWVYEQSMKAGADNVIIATDDARVEKAAKE
FGATVCMTSPNHESGTERLAEVIEVMKIPDDHIIVNVQGDEPLIPPAIINQVANNLANST
APMATLGVEITHADEVFNPNAVKVVTDKDGYALYFSRATIPWDRDAYANNGTAAESPLLR
HIGIYAYRAGFINTYINWEPSTLERIECLEQLRVLWYGEKIHVAVAEEAPAAGVDTPEDL
EAVRAIIG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatacggttgttatacctgcaagataccaatcgagccgtttaccagggaagcca
ctggctgacattggtggaaagccgatgattcaatgggtatacgaacagtcaatgaaggcg
ggtgccgataacgttattatcgctaccgacgacgctcgagttgaaaaagcggccaaagaa
tttggcgcgaccgtttgtatgacatcacctaatcatgaatcaggcactgagcgcctcgct
gaagtgattgaagttatgaagattccagatgatcatattatcgtgaatgttcaaggtgat
gagccactgattccacctgcgatcattaatcaggttgcgaataaccttgcgaacagtaca
gcgccgatggcaacactcggtgtggaaattactcatgctgacgaagtgtttaatcctaac
gccgtaaaagttgtgaccgacaaagatgggtatgccctgtactttagccgagctactatt
ccttgggatcgtgatgcttacgcgaacaatggtacagctgctgaatctccactgcttcgt
catattggcatctatgcttaccgtgcgggttttatcaatacttacatcaattgggaacca
agtacccttgagcgtattgagtgcctagagcagttacgtgtactttggtatggtgaaaag
attcatgtggcagttgcagaagaggcgcctgctgctggtgttgatacgcctgaagatcta
gaagcggttcgagctattattggctaa
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