Vibrio syngnathi: K08M4_20760
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Entry
K08M4_20760 CDS
T09193
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00130
Ubiquinone and other terpenoid-quinone biosynthesis
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01240
Biosynthesis of cofactors
Module
vsy_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
K08M4_20760 (menD)
Enzymes [BR:
vsy01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
K08M4_20760 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_M
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ARP38809
UniProt:
A0AA34XP25
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Position
1:complement(2256112..2257836)
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AA seq
574 aa
AA seq
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MNHDQAVLNRVWCNTLLEELTRSGVEHVCVAPGSRSTPLTLEAEANPKLTLHTHFDERGL
GFLALGLAKASDKPVAVIVTSGTAVANLLPATAESGLTREKLILLTSDRPIDLVGCGANQ
AIQQQGIFSSHVESALNLPSPTTQISLNWLLTSVDNALVKQRNVGGAIHINCPFPEPLYS
ANSAEMYAEYTSSISGWKSGTGCYCQTFLPNQVNTQLIAPGEYLGRKGVVILGSIDIEQA
KKAQQFATALGWPVFCDPQSGVTSDWKHYDLWMQSDVAKEQLNQCDFILQFGERIVSKRL
NQWIKSQAASFNCTQYVVVSPDAHRINQDHLPQTHIVANIESWITEQHQPILLGKHSGWA
TPLIEVANTVQQLALAQISNNDQLTELSVAVDLSTRLKDRELFVGNSLMVRLVDMLSSIS
ANQVYSNRGASGIDGLVATAAGVMKANQNPLMMLIGDTSLLYDLNSLALLTHNLTPMVIV
VTNNDGGAIFDLLPVPEQQKQSLYQMPHGFSFEHAAAQFQLGYAAPETLNGYQTIVEQHF
EQGQGTLLVEVKTPPEQASTLLKQFSSMLTEALA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgaccaagccgtattgaatagagtttggtgtaacacgttacttgaagagtta
acacgcagtggtgttgagcatgtttgtgttgcgccgggctctcgctcgacaccgttaact
ctcgaagcggaagctaatcccaagttaaccttacacacgcactttgatgagcgtggtctt
ggattcttagctttaggtttagctaaagccagtgataagccagttgccgtgattgttacc
tctggtactgctgtcgctaaccttcttcctgcgaccgctgaatcgggtttgacacgagag
aagttgattctactgacttctgatcgacccatcgacttggttggctgtggggccaatcaa
gcgattcagcaacagggtattttttcttcccatgttgaaagtgctttaaatctacccagt
ccaaccacacagatttcattgaattggcttctgacatccgttgataacgcgctggtaaaa
caacgcaatgttggtggtgcgattcatatcaactgtccgttccctgagcctctatattct
gcgaatagcgcggaaatgtatgcggaatacacatccagtatctctgggtggaagtcggga
acaggttgttactgccaaacgtttttacctaatcaagtgaatacacaactgattgctcca
ggtgagtatcttggacgtaagggtgtggttattctcggttcgatcgatattgaacaggcg
aaaaaagctcagcagtttgctacggcattaggctggccagttttttgcgatcctcaatca
ggtgtcacaagtgattggaagcattatgatctatggatgcagagtgacgtagcgaaagaa
caactcaaccagtgtgatttcattcttcagtttggtgagcgcattgtttctaagcgatta
aaccaatggataaagtcacaagcggcttcgttcaattgcacgcaatatgttgtggtttca
cctgatgcgcaccgtataaaccaagatcatctgccgcaaactcatattgttgccaatatc
gagtcatggatcaccgagcaacaccagccaattttgttaggcaaacattctggttgggcg
acgcctttaatcgaggtcgcaaatactgttcagcagctcgccctcgcgcaaatatccaat
aatgaccaactgacggaactaagtgttgccgttgatttgtcgactagacttaaagacaga
gagttgtttgtgggaaacagcttgatggtaaggctggtggatatgttgtcatcaatatct
gcgaatcaagtttacagtaatcgtggtgcatcgggcattgatggcttggtggcgacggct
gcgggcgtgatgaaagccaaccagaatcctttgatgatgttaatcggtgatacttctcta
ctgtacgacctcaactcgctggctctgctgactcataatttaacgccaatggttattgtt
gtgactaacaacgacggtggggcgatctttgatttgttgccggttcctgaacaacaaaaa
cagtcactttatcaaatgcctcatggtttcagctttgaacatgctgcagcgcaattccag
ctgggatacgctgcgccagaaaccttgaacggctaccaaaccattgtcgaacaacatttc
gaacagggtcagggtaccttgctcgtggaagttaagacgcctcccgaacaagcgtcgact
ctgctaaaacaattcagttcaatgctcaccgaggcattagcctaa
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