Vibrio syngnathi: K08M4_21030
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Entry
K08M4_21030 CDS
T09193
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00061
Fatty acid biosynthesis
vsy00071
Fatty acid degradation
vsy01100
Metabolic pathways
vsy01212
Fatty acid metabolism
vsy02024
Quorum sensing
vsy04146
Peroxisome
Module
vsy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K08M4_21030 (fadD)
00071 Fatty acid degradation
K08M4_21030 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K08M4_21030 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
K08M4_21030 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vsy01004
]
K08M4_21030 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsy04147
]
K08M4_21030 (fadD)
Enzymes [BR:
vsy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K08M4_21030 (fadD)
Lipid biosynthesis proteins [BR:
vsy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K08M4_21030 (fadD)
Exosome [BR:
vsy04147
]
Exosomal proteins
Exosomal proteins of breast milk
K08M4_21030 (fadD)
Exosomal proteins of breast cancer cells
K08M4_21030 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
ARP38836
UniProt:
A0AA34XNZ8
LinkDB
All DBs
Position
1:complement(2301753..2303447)
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AA seq
564 aa
AA seq
DB search
MDKPWLSRYPSDVPETINPDQYQSLIEMFEQSVQKFADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDKTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALYKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYSPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNMRLSVGGGMAVQRAVAEQWKKATGVHLLEGYGLT
ECAPLVTGNPYDLKDYTGAIGLPVPSTEVRIVDDEGKVVGNDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDDEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLIEFREELPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccaagtgacgtaccagaaacgatcaacccagat
cagtaccaatctcttattgaaatgtttgaacagtcggtacagaagttcgccgaccaacct
gcattcgagaacatgggatcgattatgacattccgtaagcttgaggagcgaagtcgtgct
tttgctgcttacttgcagaatgatctaaaactgaagaaaggcgatcgtgtcgcgcttatg
atgccaaacttgctgcaatacccgattgcactgtttggtgtactgcgtgcaggtatgatt
gcagtgaacgtcaacccactgtacacacctcgtgaactggaacaccaactgaatgactct
ggcgcaaaggcgattgttatcgtttctaactttgcgagcacgctagagaaagttgttgat
aaaactccggttaaacacgttgtactcactagccttgggcaaatgctgccacgagcaaaa
ggtacgattgtcgacttcgtagtgaaatacgtaaaaggtatggtgcctaagtacgatcta
ccgggtgctatttcatttagaaaagcactttacaaaggccgtcgtcttcaatatgtgaag
ccatttatggcgggtgatgacattgcattcctgcagtacacaggtggtacaacaggtgta
gcgaagggcgcaattctaacccaccgcaatatgattgcgaacgtacttcaagcgaaaggg
gcatacagccctgtgctacaagaaggccgtgaattggtggtaacagcattgccgctttac
cacgtgttcgcactgacagtgaactgcttactgtttgttgagatgggtggtcgtaacctt
ctgattactaaccctcgtgacattcctggctttattaaagagctacaaaaagttccgttt
accgcgattactggcgtaaacaccttgttcaatgcgttagtgaataacgaagatttccac
gagttggatttcagtaacatgcgtctgtctgttggcggtggtatggcggttcaacgcgct
gttgctgagcaatggaagaaagcgacaggtgttcacttactggaaggctacggtttaacc
gagtgtgcacctctggtcacaggtaacccatacgatcttaaagactacacaggcgcaatc
ggcctaccagtaccatcaacagaagttcgtattgttgatgatgaagggaaagtcgtgggc
aatgaccaagtgggtgaattgcaggttcgtggtcctcaagtgatgcaaggttactggcag
cgtccagaagcgaccaaagaagtgatcgaccaagacggttggttgtcgactggtgacatc
gttaagtttgatgacgaaggcttgttgtacatcgttgaccgtaaaaaagacatgattctt
gtgtcaggcttcaacgtttacccgaacgagattgaagacgtcgtggctctacacggcaaa
gtgttagaagttgcggctatcggccaacctcatgaagtgtctggtgaactggttaagatt
tacgttgtgaaacgtgacccgagcctaaccaaagaagacattatcgcgcactgtcgtgag
cacctaacgggctacaagatccctaaattgattgagttccgtgaagaactaccaaaaacc
aatgtaggtaaaatcttgcgccgagtgcttcgtgaagaaaacgacgcagagcttgccaaa
cgcgcaagcgagtaa
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