Vibrio syngnathi: K08M4_22890
Help
Entry
K08M4_22890 CDS
T09193
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00230
Purine metabolism
vsy00240
Pyrimidine metabolism
vsy01100
Metabolic pathways
vsy01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
K08M4_22890 (ygdH)
00240 Pyrimidine metabolism
K08M4_22890 (ygdH)
Enzymes [BR:
vsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
K08M4_22890 (ygdH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Glycos_transf_2
Motif
Other DBs
NCBI-ProteinID:
ARP39022
UniProt:
A0AA34XP80
LinkDB
All DBs
Position
1:2500397..2501761
Genome browser
AA seq
454 aa
AA seq
DB search
MITHISPAGSMDLLSQLEVERLKKTASSDLYQLYRNCTLAVLNSGSHTDNSKELLDKYQS
FDVEVVRRERGIKLELSNPPEHAFVDGEIIKGIQEHLFSVLRDIVYVNMHLADNQRLNLT
NATHITNLVFGILRNAGALTPGIEPNLIVCWGGHSINATEYQYTREVGNELGLRELNICT
GCGPGAMEGPMKGAAIGHAKQRYTDHRYLGLTEPSIIAAEPPNPIVNELVIMPDIEKRLE
AFVRMAHGIIIFPGGPGTAEELLYILGIMMHPNNVDQPMPIVLTGSKESEAYFRSIDKFI
GETLGEEAQKHYEIVIDDPARAAKIMKQAMPDVRSHRKETGDAYSYNWSLHIEPEFQLPF
DPTHESMAALDLHMDQKTESLAANLRKAFSGIVAGNVKAEGILEIEKHGPFLIDGDKELM
NKMDQLLNDFVEQHRMKLPGGTDYVPCYKIMPSS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcatatcagccctgccggtagcatggatttactctctcaacttgaagttgag
cgtcttaagaaaaccgcgtctagtgatctgtaccaactgtatcgtaactgtacgctggcg
gtactaaactcaggtagccacaccgacaactccaaagagctgctcgataaatatcaatcg
tttgatgttgaggttgtgcgtcgtgagcgtggtatcaagctcgaattgagcaatccacca
gagcatgcctttgtcgacggtgaaatcatcaagggtattcaagagcacctattttcagtg
ctgcgtgacattgtctacgtcaacatgcaccttgcagacaaccagagactcaacctaact
aatgccactcatattactaaccttgtgttcggcattttgagaaacgcaggcgcgcttacg
cccggcatcgaacctaacctgatagtgtgctggggtgggcactcaattaatgccactgaa
taccaatacactcgtgaagtgggtaacgaattgggtctgcgagagctgaacatctgtacc
ggttgtggaccgggcgcaatggaaggcccgatgaaaggcgcggcaattggtcacgctaag
cagcgttatacagatcatcgttacttggggcttactgaaccttcgatcattgcggctgag
ccaccaaacccgatcgtcaacgaactggtgatcatgcctgatatcgagaagcgtcttgag
gcgtttgttcgtatggcgcatggcatcattattttccctggcggtcctggtacggccgaa
gagctgctgtatatcttagggatcatgatgcacccaaataacgtcgaccaaccaatgccg
attgtgttgacaggttcaaaagagagtgaagcttacttccgttctatcgataaattcatc
ggcgaaaccttgggtgaagaagcacagaaacactatgagatcgtgattgatgacccagca
cgcgctgcgaaaatcatgaagcaagcaatgccagatgtacgctctcaccgtaaagagact
ggcgatgcctacagctacaactggtcactgcatattgaacctgagttccaactgcccttc
gacccgacacatgagtctatggcggcgctcgatctgcatatggatcagaaaacagaaagc
cttgcggctaatctgcgtaaagctttctcaggaattgtggcaggtaacgtcaaagccgaa
ggtattctagagatagagaaacacggcccgttcctgattgatggcgacaaagagctgatg
aacaaaatggaccaactgcttaatgactttgttgaacaacatcgaatgaagctgccgggc
ggcactgactacgttccttgctataaaattatgcctagtagctaa
DBGET
integrated database retrieval system