KEGG   Vibrio syngnathi: K08M4_22890
Entry
K08M4_22890       CDS       T09193                                 
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
  KO
K06966  pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
Organism
vsy  Vibrio syngnathi
Pathway
vsy00230  Purine metabolism
vsy00240  Pyrimidine metabolism
vsy01100  Metabolic pathways
vsy01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    K08M4_22890 (ygdH)
   00240 Pyrimidine metabolism
    K08M4_22890 (ygdH)
Enzymes [BR:vsy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.10  pyrimidine-5'-nucleotide nucleosidase
     K08M4_22890 (ygdH)
SSDB
Motif
Pfam: PpnN_C DUF4478 Lysine_decarbox LDcluster4 Glycos_transf_2
Other DBs
NCBI-ProteinID: ARP39022
UniProt: A0AA34XP80
LinkDB
Position
1:2500397..2501761
AA seq 454 aa
MITHISPAGSMDLLSQLEVERLKKTASSDLYQLYRNCTLAVLNSGSHTDNSKELLDKYQS
FDVEVVRRERGIKLELSNPPEHAFVDGEIIKGIQEHLFSVLRDIVYVNMHLADNQRLNLT
NATHITNLVFGILRNAGALTPGIEPNLIVCWGGHSINATEYQYTREVGNELGLRELNICT
GCGPGAMEGPMKGAAIGHAKQRYTDHRYLGLTEPSIIAAEPPNPIVNELVIMPDIEKRLE
AFVRMAHGIIIFPGGPGTAEELLYILGIMMHPNNVDQPMPIVLTGSKESEAYFRSIDKFI
GETLGEEAQKHYEIVIDDPARAAKIMKQAMPDVRSHRKETGDAYSYNWSLHIEPEFQLPF
DPTHESMAALDLHMDQKTESLAANLRKAFSGIVAGNVKAEGILEIEKHGPFLIDGDKELM
NKMDQLLNDFVEQHRMKLPGGTDYVPCYKIMPSS
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgatcactcatatcagccctgccggtagcatggatttactctctcaacttgaagttgag
cgtcttaagaaaaccgcgtctagtgatctgtaccaactgtatcgtaactgtacgctggcg
gtactaaactcaggtagccacaccgacaactccaaagagctgctcgataaatatcaatcg
tttgatgttgaggttgtgcgtcgtgagcgtggtatcaagctcgaattgagcaatccacca
gagcatgcctttgtcgacggtgaaatcatcaagggtattcaagagcacctattttcagtg
ctgcgtgacattgtctacgtcaacatgcaccttgcagacaaccagagactcaacctaact
aatgccactcatattactaaccttgtgttcggcattttgagaaacgcaggcgcgcttacg
cccggcatcgaacctaacctgatagtgtgctggggtgggcactcaattaatgccactgaa
taccaatacactcgtgaagtgggtaacgaattgggtctgcgagagctgaacatctgtacc
ggttgtggaccgggcgcaatggaaggcccgatgaaaggcgcggcaattggtcacgctaag
cagcgttatacagatcatcgttacttggggcttactgaaccttcgatcattgcggctgag
ccaccaaacccgatcgtcaacgaactggtgatcatgcctgatatcgagaagcgtcttgag
gcgtttgttcgtatggcgcatggcatcattattttccctggcggtcctggtacggccgaa
gagctgctgtatatcttagggatcatgatgcacccaaataacgtcgaccaaccaatgccg
attgtgttgacaggttcaaaagagagtgaagcttacttccgttctatcgataaattcatc
ggcgaaaccttgggtgaagaagcacagaaacactatgagatcgtgattgatgacccagca
cgcgctgcgaaaatcatgaagcaagcaatgccagatgtacgctctcaccgtaaagagact
ggcgatgcctacagctacaactggtcactgcatattgaacctgagttccaactgcccttc
gacccgacacatgagtctatggcggcgctcgatctgcatatggatcagaaaacagaaagc
cttgcggctaatctgcgtaaagctttctcaggaattgtggcaggtaacgtcaaagccgaa
ggtattctagagatagagaaacacggcccgttcctgattgatggcgacaaagagctgatg
aacaaaatggaccaactgcttaatgactttgttgaacaacatcgaatgaagctgccgggc
ggcactgactacgttccttgctataaaattatgcctagtagctaa

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