Vibrio syngnathi: K08M4_24270
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Entry
K08M4_24270 CDS
T09193
Symbol
clpB
Name
(GenBank) Chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vsy03110
]
K08M4_24270 (clpB)
Chaperones and folding catalysts [BR:
vsy03110
]
Heat shock proteins
HSP100
K08M4_24270 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
AAA_14
Sigma54_activat
nSTAND3
TniB
ATPase_2
AAA_18
RuvB_N
AAA_24
bpMoxR
IstB_IS21
AAA_7
Zeta_toxin
NBD_SMAX1
AAA_28
AAA_19
RHH_3
Torsin
Motif
Other DBs
NCBI-ProteinID:
ARP39154
UniProt:
A0AA34XPE4
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Position
1:complement(2661069..2663642)
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQL
RSKLSEILDRVPKVSGIGGDVQLSNAMGTLFNLCDKVAQKRQDSYISSEVFLLAAIEDKG
PLGNLLKELGLTEQKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL
DMGSLVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELH
HHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKII
QLKIEQQALTNENDEASEKRLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIKSELE
QARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEIADVL
SKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGS
FLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSTRIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIESIAAIQLE
HLKKRMEDNGYELEVSEKALKLISQVGFDPVYGARPLKRAIQQTVENPLAKAILAGKINP
EKKVQLLVNNDRIIAHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgatcgattcactagtaaattccaaattgcgatatctgatgctcagtcgctc
gcattaggtcgtgatcaccaatatatagaacctgtacacctaatggtgtctttgcttaat
caagatggcagtgcgattcgtccattgctcaccatgcttaatattgatgttgttcaattg
cgttctaaattaagcgaaatattagaccgagtgccaaaagtaagtggtattggtggtgat
gttcagctctctaacgcaatgggaacgctattcaatctatgtgacaaggtagcgcaaaag
cgtcaagacagttacatatcttcagaagtattcctactcgctgccattgaagacaaaggc
cctttaggaaacttacttaaagagctaggtcttactgagcaaaaactatctcaagctatc
gagcaagttcgcggtggtcaaaaagttgatgacccgaatgcagaagatagacgccaagca
ttagagaagttcaccattgatctgactgaaagagcagaacaaggtaaacttgatcctgtg
atcggtcgtgatgatgaaattcgtcgcacgattcaagtccttcaacgtcgaactaagaat
aaccctgtgattatcggtcaacccggtgtgggtaaaaccgcgattgtcgaaggtttagct
cagcgtattatcaataatgaagttccagaaggcttaagaggtcgaagagttctttcattg
gacatgggctcattggtagcgggtgcgaaatatcgtggtgaattcgaagaacgtctaaaa
tcggtgcttaatgaattatcgaaagaagaaggcaatgtcattctctttatcgatgaaatt
catacgatggtcggcgcaggtaaaggcgaaggctctatggatgcgggcaacatgctgaaa
ccagcattagctcgtggtgaactgcattgtgtcggcgcaacaacgctcgatgagtatcgc
caatatatagagaaagaccctgcgttagagcgtcgcttccaaaaagtgatagtggatgaa
ccaacagtagaagatacagtcgctattcttcgtggtttgaaagagcgctatgaacttcac
catcatgtagaaattaccgatcctgctattgtagcggcggcaactctatctcaccgatac
gtttcagatcgtcagttaccagataaggcgattgatctcattgatgaagcggcttcgagt
attcgaatgcagatagattcaaagcccgagtcactggataagttagagcgtaaaatcatt
cagttgaagatcgagcagcaagctcttactaatgaaaatgacgaagccagtgaaaagagg
cttcgcacgctacaaagcgaactttctgagaaagagcgagattttgcagagcttgaagaa
gtttggaacgctgaaaaggcggcgttgtctggcacgcaacatatcaagtcagagctagaa
caagctcggatggatatggattttgcacgacgtgctggtgaccttaaccgtatgtctgaa
ttgcaatatggtcgaatcccagaattggagaagcagttagatctcgcgactcaagctgaa
atgcaagaaatgaccttgttacgtaacaaggtgactgacgctgagattgccgatgtcctt
tcaaagcaaaccggcatcccggtttctaaaatgctagaagcagaaaaagagaagcttctg
aaaatggaaggtgttctgcataagcgggttatcggtcaagcggaagcggttgaagtcgtg
tcgaatgcaattcgtcgtagccgtgccggtttgtctgatcctaataagccgattggttcg
ttcttattcttagggccaacaggtgtcggtaaaacggaactgtgtaaaacattggcgaac
tttatgttcgatagtgaagatgcgatggtgcgtatcgatatgtctgagtttatggagaaa
cactctgttgctcgtttagttggtgctcctccgggttatgtgggttatgaagaaggtgga
tacttaaccgaagcggtacgtcgcaagccttattctgtcattttgcttgatgaggtagag
aaagcgcaccctgatgttttcaatattctattgcaggttttagatgatggacgattaact
gacggacaaggtcgcacggtcgattttagaaataccgtggtaataatgacatcgaaccta
ggttcaactcgtattcaagaaaatttcaatacattggattaccaagggattaaaaatgag
gttatggaagtggtaggtaaacattttcgacctgagtttttgaaccgtgttgatgaaagc
gttgtgttccatccattaggccaagagcacattgagtcaattgccgctattcagcttgag
catttgaaaaagcgaatggaagacaatgggtatgaactcgaggtttcagaaaaagcgctc
aagctaatctctcaagttggttttgaccctgtgtatggtgcaaggcctcttaaaagagca
attcaacaaactgtagagaacccgttagcgaaagcgatactggctggaaaaataaatcca
gagaagaaagtgcagctattggtgaataacgaccgaattattgctcaccaataa
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