KEGG   Vibrio syngnathi: K08M4_24830
Entry
K08M4_24830       CDS       T09193                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
vsy  Vibrio syngnathi
Pathway
vsy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K08M4_24830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_24830
Enzymes [BR:vsy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     K08M4_24830
DNA repair and recombination proteins [BR:vsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     K08M4_24830
 Prokaryotic type
     K08M4_24830
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ARP39210
UniProt: A0AA34TQK6
LinkDB
Position
1:complement(2727965..2728645)
AA seq 226 aa
MSAPKTWESIINDERDKEYFQSVLAFVEQQRNSGKTVYPPQELVFSAFDMTPFESVRVVI
LGQDPYHGANQAHGLAFSVLPGVKIPPSLRNMYKELAQDIEGFEIPSHGYLDTWASQGVL
MLNTVLTVEEAKAHSHAKCGWETFTDAIIAELNQRSEPIIFLLWGAHAQKKGQAIDADKH
HVLVAPHPSPLSARRGFFGCQHFSMTNELLSSINQQPIDWTLPLAL
NT seq 681 nt   +upstreamnt  +downstreamnt
atgagcgcaccaaagacttgggaatccattattaatgatgaacgtgacaaagagtacttt
cagagtgtcctcgcgtttgttgaacagcaacgcaatagtgggaaaaccgtctaccctcct
caagagctggtgttcagtgccttcgatatgacgcctttcgagtccgtacgcgtggttatc
ctagggcaagatccttatcacggcgctaaccaagctcatggcttagctttttctgtactg
ccaggtgtaaaaatccctccttctctacgtaatatgtacaaagagcttgcgcaagatata
gagggctttgagatcccgagtcatggctacctcgacacttgggcatctcaaggggtgtta
atgttgaatacggtactgacagtagaagaggcaaaagcacactcacatgctaagtgtggt
tgggaaacctttaccgatgccattattgcagagctcaatcagcgctctgaaccgatcatc
ttcttgttgtggggcgcacacgcccagaagaaaggccaagcgattgatgcagacaagcac
catgtgttggttgcacctcatccatcaccattatcagcacgccgtggtttcttcggttgt
cagcatttttcgatgaccaacgagctactctcttctattaatcaacagcctatcgattgg
acattaccactggcactgtag

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