KEGG   Vibrio syngnathi: K08M4_24840
Entry
K08M4_24840       CDS       T09193                                 
Symbol
nfo
Name
(GenBank) Endonuclease 4
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
vsy  Vibrio syngnathi
Pathway
vsy03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    K08M4_24840 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsy03400]
    K08M4_24840 (nfo)
Enzymes [BR:vsy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     K08M4_24840 (nfo)
DNA repair and recombination proteins [BR:vsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     K08M4_24840 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: ARP39211
UniProt: A0AA34XPC6
LinkDB
Position
1:complement(2729061..2729969)
AA seq 302 aa
MTNNNSSSKPETNIKFIGAHVSAAGGVDQAPMRAREIGANAFALFTKNQRQWAAKPLEAK
TISAFKANCKMLGFSAEHILPHDSYLINLGAPEEEKLEKSRAAFIDEMERCNQLGLTLLN
FHPGSHLKKISESDCLTKIAESINLAHQAVPDVIAVIENTSGQGTNLGWKFEHLAEIIDQ
VEDKSRVGVCLDTCHTFTAGYDLRTKAACEHTFAEFDRIVGMHYLRAMHINDSKAEFASR
VDRHHSLGKGEIGWDCFEYIASDSRFNGIPLILETIDSTIWKEEIQQLRMFHRSATLASE
EA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacaaacaataattcatcttcaaaacctgaaaccaatattaagtttattggggcgcat
gtgtctgctgcgggcggtgttgatcaggcgccaatgcgcgctcgtgagataggcgccaat
gcgttcgcactgtttaccaaaaaccaaaggcagtgggcagcaaagccgttagaagccaaa
accatcagtgcctttaaagccaattgtaaaatgttgggctttagtgctgaacacattctt
cctcatgattcctaccttattaacctaggagcaccagaagaagagaagttagagaaatca
cgtgcggcttttattgatgaaatggagcgttgtaatcaactaggactcacgcttttgaat
tttcatcctgggagtcatttgaagaaaatctcagaaagcgactgtttgaccaagatcgct
gagtctatcaacttggcacatcaagcggtgcctgatgtgattgctgtgattgaaaatacc
tcagggcaggggactaacctgggttggaagtttgagcacctagcagagatcatcgaccaa
gtagaagataagtcacgcgtcggtgtgtgtttagacacttgccatacgtttacagccggt
tatgacttacgaacaaaagcggcgtgtgagcatacttttgctgagtttgaccgtattgtc
ggcatgcactatctaagagcaatgcacatcaatgattcaaaagctgagtttgcgagccga
gtcgatcgacaccattctttaggtaaaggcgagattggctgggattgttttgagtatata
gcctcggattctcgctttaatggtattcctcttattttagaaaccattgattcgactatc
tggaaagaggaaattcaacaacttaggatgtttcatcgctcagcaacgctagcgagcgaa
gaagcgtaa

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