Vibrio syngnathi: K08M4_25080
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Entry
K08M4_25080 CDS
T09193
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00220
Arginine biosynthesis
vsy00240
Pyrimidine metabolism
vsy00250
Alanine, aspartate and glutamate metabolism
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01240
Biosynthesis of cofactors
Module
vsy_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K08M4_25080 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K08M4_25080 (carB)
00220 Arginine biosynthesis
K08M4_25080 (carB)
Enzymes [BR:
vsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
K08M4_25080 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
SLC3A2_N
Motif
Other DBs
NCBI-ProteinID:
ARP39235
UniProt:
A0AA34TR61
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All DBs
Position
1:complement(2763106..2766336)
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AA seq
1076 aa
AA seq
DB search
MPKRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIQWEVVRNIIAKEKPDAVLPTMGGQTALNCALDLEKYGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPTADTAKTMEEAYKVQEMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTTIRHELKEAGSDRIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAKG
FAGLNKDELMKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSDT
AYMYSSYDDECESNPTDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARELEAAGVPI
IGTSPDAIDRAEDRERFQVAVDRLGLLQPENATVTTMEQAVEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAIEVDVDAICDGERVVIAGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLMNTQFAVKNNEVYLIE
VNPRAARTVPFVSKATGAAVAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYSKAELGCGNIYPEGGRALLSVREGDKERVVDLA
SKLSKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKTSVTSVQELHAQVKASQA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattaaaagtgttctaattcttggtgctggtccgattgttatc
ggtcaagcatgtgagtttgattactctggtgctcaagcttgtaaagcacttcgcgaagaa
ggttaccgagttattcttgtaaactcgaacccagcgacaatcatgactgacccagacatg
gctgatgcgacttacatcgaacctatccaatgggaagtggttcgtaacatcatcgctaaa
gagaagccagatgcagttctaccgacaatgggcggccaaactgcacttaactgtgcgtta
gatttagaaaaatacggcgtacttgaagagttcggcgtagagatgattggtgcaacggct
gacgctatcgataaagctgaagaccgctctcgttttgataaagcaatgaaatcgattggt
cttgagtgtccaacggctgatacagcgaaaacgatggaagaagcttacaaagttcaagaa
atggttggcttcccttgtatcattcgtccatcgtttacgatgggtggtacaggcggtggt
atcgcttataacaaagaagaatttgaagaaatctgtcgtcgtggtttggacttatctcca
accaacgaacttctaatcgatgagtcacttatcggttggaaagagtacgagatggaagtg
gttcgcgacaaaaacgacaactgcatcatcgtatgtgcgattgaaaacttcgacccaatg
ggtattcacacgggtgactcaatcaccgtagctccagcacaaacgctgacagacaaagaa
taccaactaatgcgtaatgcatctctagcagtactgcgtgagattggtgttgaaacaggt
ggttcaaacgtacagtttggtatcaacccgaaagatggccgtatggttatcatcgagatg
aacccacgtgtatctcgttcttctgcacttgcttctaaagcaacaggtttcccaatcgct
aagattgcagcgaaacttgctgttggctttacgctagacgagctaatgaatgacatcact
ggcggtgcaacgccagcatcattcgaaccaacaatcgactacgtagtaactaagattcct
cgttttaacttcgagaaatttgcaggtgctaacgaccgtctaacgacgcaaatgaagtcg
gttggtgaagttatggctatcggccgtaaccaacaagaatctctacagaaagcacttcgc
ggtctagaagttggcgcaactggttttgacgaaatggttgacctagatgcacctgacgct
ctaacgacgattcgccatgagcttaaagaagctggttctgaccgtatttggtacatcgca
gacgctttccgtgctggtatgtcagttgatggtgtattcaacctaacgcaaattgaccgc
tggttcctagttcaaatcgaagacatcgtaaaactagagcaagaacttaaagcgaaaggc
tttgctggtctgaataaagacgagctaatgaagcttaagcgtaaaggttttgctgatgct
cgcctgtctaagattctaggtgtggctgaaagtgaaattcgtcgtctacgtgaccaatac
gatattcacccagtctacaagcgtgtagatacgtgtgcggctgagttctcttctgatacg
gcttacatgtactcatcttacgatgatgaatgtgaatcgaacccaacagacaaagataaa
atcatgatcttaggcggcggtccaaaccgtatcggccaaggtattgaatttgactactgt
tgtgtacatgcatctctagcactacgtgaagatggctacgaaacaatcatggttaactgt
aaccctgagacagtttcgacggactacgatacgtctgaccgtctgtactttgaaccagta
actctggaagacgtactagcaatcgttcgtgttgagaagccaaaaggcgttatcgttcag
tacggtggtcaaacaccactgaaactggctcgtgagcttgaagctgctggcgtaccaatc
attggtactagcccagacgcaatcgaccgtgcagaagaccgtgagcgtttccaagttgct
gttgaccgtcttggtcttctacagccagaaaacgcgacagtaacaacaatggagcaagcg
gtagagaaatctcgcgaaatcggcttcccactggttgttcgtccttcttatgttcttggt
ggtcgtgcgatggaaatcgtatacgacgagcaagacttacgtcgctacttcaacgaagca
gtaagtgtttcaaacgaatctccagtactacttgatagcttcctagatgatgcaattgaa
gtagacgttgatgcgatttgtgacggtgagcgtgttgttattgcgggtatcatggagcat
atcgaacaagcgggtgttcactctggtgactcagcatgttctcttccggcttacacgcta
agccaagaaatccaagacgtaatgcgtgagcaagttgaaaagctagcgttcgagttgggt
gttcgtggtctaatgaatacgcagtttgctgttaagaacaacgaagtgtacctaatcgag
gttaaccctcgtgcagcacgtacagtaccgttcgtatcgaaagcaacaggcgcagcagtc
gctaagattgcagctcgtgttatggcaggtcaatcgctagagtctcaaggctttacgaaa
gaaatcatcccaccatactactcagtgaaagaagttgttcttccgttcaacaaattccct
ggtgttgacccactattaggcccagaaatgcgctctactggtgaagttatgggtgttggt
gcaacgtttgctgaagcatactctaaagctgaattgggttgtggcaacatctacccagaa
ggcggccgtgcacttctttctgttcgtgaaggcgacaaagagcgcgttgttgacctagca
tctaagctatctaagcttggttaccagctagacgctacacatggtactgcggttatcctt
ggcgaagcgggtatcaatccacgcctagtaaacaaggtacacgaaggtcgtcctcacatt
cttgaccgtatcaagaacaacgagtacacgtatatcgtgaacactgcggctggccgtcaa
gcgattgaagattctaaagttcttcgtcgtggtgcattggctgagaaagtgaactacacg
actacgctaaacgctgcattcgcgacttgtatggcgcacactgcagacgcgaaaacgtca
gtaacttcagttcaagagctacacgcacaagttaaagcttctcaagcttaa
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