Vibrio syngnathi: K08M4_26890
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Entry
K08M4_26890 CDS
T09193
Symbol
dnaB
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K08M4_26890 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsy03032
]
K08M4_26890 (dnaB)
Enzymes [BR:
vsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K08M4_26890 (dnaB)
DNA replication proteins [BR:
vsy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K08M4_26890 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
nSTAND3
CbiA
divDNAB
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
ARP39395
UniProt:
A0AA34TR27
LinkDB
All DBs
Position
1:complement(2979782..2981173)
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AA seq
463 aa
AA seq
DB search
MDTKSQKSANDQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVAEKVVAKDFYSRPHRLI
FEAVKDILEESSPLDLITLSEHLELREQLEEVGGFAYLADLAKNTPSAANINAYADIVAQ
RALVRSLIGVANEIADSGYDPQGRTSEELVDLAESKVFAIAEGRASENEGPQNVDSILEK
TLERIEILYKSPQDGVTGVDTGFNDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENA
AMKQDKPVLIFSLEMPAEQLMMRMLASLSRVDQTKIRTGQLDDEDWARISSSMGILMDKK
NMYIDDSSGLTPTEVRSRARRIAREHDGISMIMIDYLQLMRVPSLSENRTLEIAEISRSL
KALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNPDS
SLKGIAEIILGKQRNGPIGSVRLTFQGQHSRFDNYAGPAFDDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtggataccaaaagtcagaaatcagccaacgatcaggtggacgccatcaaggtcccgcca
cattcattagaagctgagcaatctgttattggcggtttgttattggataacgaacgctgg
gatacggtggccgaaaaggttgtggccaaagacttttatagccgtcctcaccgtctgatc
tttgaagcggtaaaggatatccttgaagaaagctctcctctggatcttattacactctct
gaacatttagagctgcgtgagcaacttgaagaagtgggtggctttgcttaccttgctgac
ctagcgaaaaacaccccaagtgcggcaaacatcaatgcctatgctgatatcgtggcacaa
cgtgcattggtgcgtagcctgattggtgtggcaaatgaaattgccgattctggttatgac
cctcaaggtcgtacatcggaagaacttgttgatcttgctgagagtaaagttttcgcgatt
gccgaaggccgagcaagtgaaaatgaaggtccacaaaacgttgatagcattctagagaag
acgctagaacgtatcgaaatcttatataaatcgccacaagatggtgtgacaggtgtcgat
acgggtttcaacgacctcaataagaaaacggcaggccttcagggttctgacttaatcatt
gttgctgcgcgtccatcgatgggtaaaaccacgtttgcgatgaacctatgtgaaaacgca
gcgatgaagcaagacaagccagtgttaatcttctcgctagagatgccagctgaacagctg
atgatgcgtatgcttgcatcactttctcgtgtcgaccaaaccaagattcgtacgggtcaa
ttggatgatgaagattgggctcgtatttcatcgagtatgggtattcttatggataagaag
aatatgtatatcgatgatagctcgggtctaacaccaaccgaggttcgttcgcgtgctcga
cgtatcgcgcgtgagcatgatggtatctctatgatcatgatagattaccttcaattgatg
cgtgtaccttcattgtctgaaaaccgtaccttagagattgccgaaatttctcgttcccta
aaagcccttgcgaaagagctgaatgtgccggttgttgcactttctcagcttaaccgttcc
ctagagcaacgtgcagataagcgcccagtaaactcggatttgcgtgaatcaggttcgatc
gagcaagatgccgacttaatcatgtttatctatcgtgatgaggtttataacccagatagt
tcattgaaaggcatcgctgagatcatccttggtaagcaacgtaacggtccgatcggttcg
gttcgtcttacgttccaaggtcaacactcccgatttgataactatgcaggtcctgcattt
gatgatgagtaa
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