Vibrio syngnathi: K08M4_27060
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Entry
K08M4_27060 CDS
T09193
Symbol
amiB
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase AmiB precursor
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
K08M4_27060 (amiB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsy01011
]
K08M4_27060 (amiB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vsy03036
]
K08M4_27060 (amiB)
Enzymes [BR:
vsy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
K08M4_27060 (amiB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsy01011
]
Peptidoglycan biosynthesis and degradation
Amidase
K08M4_27060 (amiB)
Chromosome and associated proteins [BR:
vsy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K08M4_27060 (amiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Amidase_3
AMIN
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
AMIN-like
GntR
Motif
Other DBs
NCBI-ProteinID:
ARP39412
UniProt:
A0AA34XPK9
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All DBs
Position
1:complement(2999450..3001129)
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AA seq
559 aa
AA seq
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MMAAVFSILFSSLVSANSLKSLRVWPSPEETRVVIDLKSEADFSYFTLSSPSRLVVDLKK
TNLATKLPVVVKDSPVLSKIRKSSPPDKNTYRLVFELKKSSKAELFKLSPTPGGQYGHRL
VIDLPHGAASKGKATSTPSKPTVSKNLNQVKRQRDVLIVIDPGHGGEDPGSIGPSRKYEK
NATLSISKKIAAQLNAVPGIKTRLTRNADYFVNLNRRVAIARENEAHLLISIHADAFTTP
QPRGGSVFVLNTRRANTEISRWIENKEKQSELLGGSGAAFTGNIADKNVNQTLLDLQFSH
SQKEGYKLATTILSEMGKVAKLHNSKPINTSLAVLRSPQIPSVLVETGFISNPTEEKLLF
QRSHQDKLARAVTKAVVKYLKANPPEGIIISNAAAASNSTSQHKVQRGESLSVIAKKYGT
STQAIVKLNGLKSTSLAVGQTLKIPSSGSQAATTTSRKTVTHTVKSGEYLGKIASRYKVS
VASIKRENHLKSETVRVGQKLRITVEVKDIPLRKHKVARGDYLGKIASKYGVSVNSIRQA
NKLRSDELAIGQVLIIPHK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctgttttttctatactgttttcttcacttgtttctgcaaactcactaaag
agtttaagggtctggccttctccagaagaaactcgtgtggtaatcgatttaaaatcagaa
gcggatttcagctatttcaccctgagtagcccgagtcgcttggttgttgatttaaaaaag
accaaccttgcaaccaagttaccggtcgtggtgaaagacagccctgttctatctaagatt
cgtaagagctcaccgccagacaaaaacacctatcgcttggtttttgagttaaagaagtcc
tctaaagcagagttgtttaaactcagtccaactcctggtggtcagtacggacatcgcttg
gtgatcgacttacctcacggtgcggcaagtaaaggcaaagcaacatcaacgccgagtaag
ccaacagtgagtaagaacctcaatcaagttaagcgtcagcgcgatgttctgattgtgatt
gaccctggtcacggtggtgaagatcctggttccattggcccatctcgtaaatatgagaag
aatgcgactcttagtatttcgaaaaagatcgccgcgcagttgaatgcagttccgggaatc
aaaacgcgtttaacacgtaatgctgattactttgtaaacctgaacagacgtgttgcaatt
gctcgtgagaacgaagcacacctcttgatctccattcacgccgatgcctttacgacgcct
caaccaagaggtggttcggtgttcgtgttgaatactcgacgagcaaatactgagatttcc
cgttggattgagaacaaagagaaacagtcagaattgctgggcggcagtggtgctgcgttt
actggcaatatcgccgataaaaacgtcaaccaaaccttgcttgatttgcagtttagccac
tctcaaaaagagggctataaactggcaacgaccattctctctgaaatgggtaaggtcgca
aaactgcataacagtaagccgattaacaccagtttggcagtgttacgttcaccacaaatt
ccatcggtacttgtagaaacaggctttatttcgaacccgaccgaagagaagcttcttttc
caacgttcgcatcaagacaaacttgcgcgagctgtgaccaaagcggtcgttaaatatttg
aaagcgaatccaccagaagggattattatttctaacgcggcggcagcttctaactctacc
agtcagcacaaagtacagcgtggtgaatcattgtctgtgattgcgaagaagtacggcacg
tctacacaagcaatagtgaagttgaatggtttgaagtcgacgagcttagcggtagggcaa
actctaaaaatcccaagctcgggttcacaagcggcgaccacaacaagccgtaaaacggtg
acacacacggttaagtctggagagtacttaggcaaaatcgctagccgttacaaagtgtcg
gtagcaagcattaaacgtgagaaccacttgaaatcagaaaccgtgagagtaggtcaaaag
ttacgtattacggttgaagtaaaagatatacctctacgtaaacataaagttgcaagaggc
gattatcttggcaagattgcttcgaaatatggcgtgagcgtcaacagtattcgtcaagca
aacaaactacgttccgatgagttggccattggccaagtgctgattattccgcacaaatag
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