Vibrio syngnathi: K08M4_27810
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Entry
K08M4_27810 CDS
T09193
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00541
Biosynthesis of various nucleotide sugars
vsy01100
Metabolic pathways
vsy01250
Biosynthesis of nucleotide sugars
Module
vsy_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K08M4_27810 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
K08M4_27810 (hldD)
Enzymes [BR:
vsy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
K08M4_27810 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
Core region
K08M4_27810 (hldD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
NAD_binding_10
adh_short
KR
Phage_T7_Capsid
TrkA_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
ARP39472
UniProt:
A0AA34XPM9
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All DBs
Position
1:3070926..3071867
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEAGHNDILVVDNLKDGKKFKNLVDLDITDYMDRDDFLTQV
MAGDDFGHIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCIEREIPFLYASSAATY
GETDTFIEEPQYEGALNVYGYSKQQFDNYVRRLTADATAHNETLSQITGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSETFKRDFVYVGDVAAVNLWFLKNGVSGIFNL
GTGNAESFEEVAKAVIKHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRNAGCDVQFKSV
AEGVSEYMQSVNR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggtggtgcaggcatgattggcagcaatattgttaaggcgctcaat
gaagcaggccacaacgatattctagttgtcgacaacttaaaagatggcaaaaaatttaag
aacctggttgacctagatatcaccgattacatggatcgtgatgactttctaactcaagtt
atggctggtgatgatttcggtcatattgaggctattttccatgaaggtgcatgttctgcg
accaccgagtgggatggcaaatacatgatgctcaacaactatgaatactctaaagagtta
ctgcattactgtatcgagcgtgagattccgttcttgtatgcttcttctgctgccacttat
ggtgaaaccgatacctttatcgaagagccgcagtacgaaggcgcgctaaacgtatacggc
tattcaaaacagcaatttgataactatgtgcgtcgcttaactgcagatgcaactgcacac
aacgaaacgctttctcaaatcactgggtttcgatacttcaatgtctacggtccacgtgaa
cagcacaaaggcagcatggcttctgtcgctttccacctaaacaatcaaatgaacgctggt
gaaaacccgaaattattcgcaggaagcgaaaccttcaagcgtgattttgtgtatgtgggt
gatgttgcggccgtaaacctgtggttcttaaaaaatggcgtatcaggtatcttcaaccta
ggtacaggtaatgccgaatcatttgaagaagtcgcaaaagcggtgattaaacatcacggt
aagggagagattgaaactatcccattccctgagcatttgaaaggtgcttaccaagagttt
actcaagctgatttaactaagttgcgtaatgccggttgcgatgttcaatttaaatcggtt
gctgaaggtgtcagcgagtacatgcagtccgttaatcgctag
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