Vibrio syngnathi: K08M4_27930
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Entry
K08M4_27930 CDS
T09193
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00540
Lipopolysaccharide biosynthesis
vsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K08M4_27930 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
K08M4_27930 (rfaF)
Enzymes [BR:
vsy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
K08M4_27930 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
Core region
K08M4_27930 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
ARP39484
UniProt:
A0AA34XPR9
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All DBs
Position
1:complement(3081910..3082965)
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AA seq
351 aa
AA seq
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MKILIIGPSWVGDMVMSQGLYIELQRQYPDAKIDVLAPAWCKPILERMPQVNQALEMPLG
HGQFDLKSRYKIGKSLREVQYDKAYVLPNSAKSALIPLFARVPERVGWKGEMRFGLLNDV
RTNKKAFQYMLERYVALAHPKAEMTGSGCLGELSSLPFPSLQVVDSSQQEAMEQFGLNNQ
RPVLGLCPGAEFGPAKRWPDNHFATAATAMIKQGYQVWLFGSAKDREVTQKIIEQVPVNM
QQHCFNLAGDTSLIQAVDLIGACRTVVSNDSGLMHVAAAVGCNVVAVYGSSSPKYTPPLT
NKLAIINTDIECRPCFERTCPKQHLKCLTELMPSRVISAIEQFDVISQGKI
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgattattggcccgtcatgggttggagacatggtaatgtctcaaggctta
tatattgagttgcaaagacagtatcctgacgcaaaaattgatgttttagcgccagcgtgg
tgtaagcctattttggaaagaatgccacaagtcaatcaagctcttgaaatgccactaggg
catgggcaatttgatctgaaatctcgttataagatcggcaaatcgttgagggaagtacag
tacgataaagcgtacgtattacctaactccgcgaaatcagctttgattcccctgtttgca
cgcgttcctgaacgagttggctggaaaggtgaaatgcgttttggtttgcttaatgacgtt
agaaccaataaaaaagcgtttcaatacatgttagagcggtatgtagcgttagcgcaccct
aaagctgaaatgacgggtagtggttgtttaggtgaattgtcatcattaccttttccaagc
ctacaagttgttgactccagccaacaagaggctatggagcaatttggtttaaacaatcaa
aggcctgtccttggtttatgtcctggtgctgagtttggccctgcgaaacgttggcctgat
aatcactttgcaacagcagcgacagcgatgataaagcaaggttaccaagtgtggttgttt
ggctcggctaaagatcgtgaagtaacccaaaagataatcgaacaagtccctgttaatatg
cagcagcattgcttcaatttagctggagatacgagcttaattcaggctgtagacttgatc
ggggcttgtcgtactgtcgttagcaatgattctgggctgatgcatgtggccgctgcggtg
ggctgtaatgtcgtggctgtttacggctctagttcacctaaatatacgcctccgctaacc
aacaaactggcgatcatcaataccgatattgagtgccgaccttgctttgaacgaacttgt
cccaagcagcacctaaagtgcctaactgagttaatgccgagtagagtcattagtgctatt
gagcagtttgatgttatttctcaaggcaaaatataa
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