Vibrio syngnathi: K08M4_31010
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Entry
K08M4_31010 CDS
T09193
Symbol
apxIB_2
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
vsy
Vibrio syngnathi
Pathway
vsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K08M4_31010 (apxIB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsy02000
]
K08M4_31010 (apxIB_2)
02044 Secretion system [BR:
vsy02044
]
K08M4_31010 (apxIB_2)
Transporters [BR:
vsy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
K08M4_31010 (apxIB_2)
Secretion system [BR:
vsy02044
]
Type I secretion system
RTX toxin transporter
K08M4_31010 (apxIB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_22
AAA_18
Rad17
AAA_29
DUF5079
ABC_ATPase
AAA_21
PRK
Tmemb_9
MeaB
AAA_23
Cytidylate_kin
nSTAND3
CoaE
SbcC_Walker_B
AAA_30
AAA_28
APS_kinase
RhgB_N
Motif
Other DBs
NCBI-ProteinID:
ARP39778
UniProt:
A0AA34TSN6
LinkDB
All DBs
Position
2:complement(117453..119645)
Genome browser
AA seq
730 aa
AA seq
DB search
MDMTLSTTQDVPIAQDTSCTQDTSSNQDISATKDNGGIDAVVYAGNHFHKKSTKTQLKHA
LGVNHSNLSDMQIREAADYIGLKSQVTKVKSNELDTLPLPVLIEIDNSWKVLTKSADGSS
LLYDPTTQLDQQSELSLSSQLSMYKVMLVADERLSNKEVKFGLSWFAPSIWRQKSQMRDV
FFYAIALQIFALVSPLLFQNVIDKVLVGRSLSSLHVLAMAMLALAIAEPAYSYLRNTVFG
HLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLVLDLI
FVAVFIAVMFHYASTLTWLVIGSLIIYFLLWLIAGPLIRKKVESEYESDADATTFLTEAV
TGIETIKTTATEHRFLHQWQRILSQQLKRSFDAQKSGLIAGQSIALIQKLTAALLLWWGV
SAVLNGELTPGELVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALKRVGDILDEPKENSKQ
GLASVPELNGGIEFHNIRFRYHEDAPEVLANLSLEIKPGQFIGITGPSGSGKSTITRLLQ
RLYVPQHGQVLVDGMDLAIADPISLRRNMSVVLQDSILFSGSVADNIRLSKPQASDEEMR
HAAQLAGALEFIEELPHGFDQPVGEKGSSLSGGQRQRVALARALLVNPRILLLDEATSAL
DYNSEAAIMSNMDEICRGRTVISIAHRLNTLRHADNILVLDKGQVCENGTHDELVEKEGL
YAKLWKQQIG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaccttatcaacaacacaagatgtgcctatcgcccaagatacatcttgcact
caagatacctctagcaatcaagatatatctgccacaaaagataatggcggaatagacgcc
gtcgtttatgccggaaatcactttcacaagaaatcgactaaaacacagctaaaacatgca
ttgggtgtcaatcattccaatttgagcgacatgcaaataagggaagcggcggattatatc
ggcctgaaaagtcaagtaacgaaagtaaaatcaaacgagttagatacccttccactaccc
gttttaattgaaatcgacaatagttggaaagtgctcacaaagtcagccgatggttcctct
cttttatatgacccaaccactcaattagaccaacagagtgagcttagtctgagtagtcaa
ttatcgatgtacaaggtaatgctggtcgcggatgaaagactaagtaacaaagaagtgaaa
tttggccttagttggtttgccccctctatttggcgtcaaaaaagccagatgcgtgatgtg
tttttctatgctattgcacttcagatattcgcactagtaagcccgttgctatttcaaaat
gtcatcgacaaagtactagtaggtcgcagtttatcaagtcttcatgtgctcgcaatggcc
atgctcgcattagctattgctgaaccagcatacagctacttacgcaataccgtctttggt
catttggcgagtcaggttaatgctgagctatcagggcgcctttatcgtcacttagttggc
cttccactcacttattttaagcagagacaaaccgggcaaatcattgcgcgagttcgtgaa
atggcacaaatccgtcagtttttaacgggttcgacgttaatgttagtactcgacttaatt
tttgtggctgtctttatcgccgtcatgttccactatgctagtactctgacttggttagtc
atcggttcattgatcatctacttcttactttggcttatcgctggccccttaataagaaaa
aaagtggaatcagaatacgaatcagacgccgacgccacaacctttttaactgaagcagta
acaggcattgaaaccattaaaacaactgcgactgaacatcgattcttacatcaatggcaa
cgcatactcagccagcaactaaagcgtagtttcgatgctcaaaagtctgggttaatcgca
gggcaaagcatcgcacttatccaaaagcttaccgccgcattattgctatggtggggagtc
agcgctgtactaaatggtgagctaacgcccggtgaattggtcgcattcaatatgttagct
ggtcatgttacccaaccggtacttagacttgctcaaatttggcaagactttcaacatact
ctcattgcattgaagcgagtgggtgacattcttgatgaaccaaaagaaaacagtaaacag
gggctagcttctgtccctgaactcaatggtggcatagagtttcacaacattagattccgt
taccacgaagacgctccagaggtactagctaacctctcattagaaataaaaccagggcaa
tttatcggtattacaggcccatcgggctcagggaaaagcaccataacccggctactacaa
cgcttgtatgttccccagcatggtcaagtgttggtcgacggtatggacctagctatcgcg
gaccctatatcgttacgccgcaatatgagtgttgtgttgcaagacagcattcttttctca
ggaagtgttgcagataacattcgcctaagtaagccacaagcttcagatgaagagatgcgc
cacgcagcgcaacttgctggcgctctagaatttattgaagagcttccccacggattcgat
caacctgttggtgagaaaggctcttctctatctggtggtcagcgtcaacgtgtcgcattg
gcaagagccttactcgtaaaccctcgaattttgctgcttgatgaagcgacttctgctctc
gattataactctgaagctgccatcatgagcaacatggacgagatctgtcgaggtagaacc
gtaattagcatcgcacaccgcctcaacactcttcgtcatgcggataacattctagttctt
gataaaggccaagtgtgtgaaaacggaactcacgatgagctggttgagaaagaagggctt
tatgccaaactctggaaacaacagatagggtaa
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