Vibrio syngnathi: K08M4_31800
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Entry
K08M4_31800 CDS
T09193
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS precursor
KO
K19236
L,D-transpeptidase YcfS
Organism
vsy
Vibrio syngnathi
Pathway
vsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
K08M4_31800 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vsy01002
]
K08M4_31800 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsy01011
]
K08M4_31800 (ycfS)
Peptidases and inhibitors [BR:
vsy01002
]
Cysteine peptidases
Family C82
K08M4_31800 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
K08M4_31800 (ycfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
ARP39857
UniProt:
A0AA34TS44
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All DBs
Position
2:227975..228949
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AA seq
324 aa
AA seq
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MSYCANSTPLHSMRTQIRKVALPLVRVTMLVAAMASSCVSAATFVLPPAESRIVGRIQQH
EVAAGETLAIIAKQYDIGFLSLMAANKGVDPFLPAEGYVLSIPSRLILPDTPRKGIVINL
AELRLYFFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNPTWTPPNSIRKEYLEKGI
ELPKVVPAGPENPLGEYALRLAYGAGDYLIHGTNKDFGIGLRVSSGCIRMEPKDIEWLFE
QVSRGEQVTIIDEPIKVSLEPDRSVFVEAHEPLTRSDGSKKLLQIPVELKWWLEDADLPS
SKAKAVIFAQNGVPVEIAPPVIEF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtattgcgctaactcgacgcctttgcactcaatgagaacacagatacgtaaggta
gctttacctctagtgagggtcaccatgcttgtggcagcgatggcttcgtcgtgtgtgtct
gcggcgacctttgtactgcctccggctgaaagccgtatcgtcggcagaatacaacaacac
gaagtggctgctggcgaaacgttggctatcattgctaagcaatacgatattggttttctc
tctttaatggcggcaaacaaaggcgttgatccttttcttcctgctgaaggttatgtgtta
agtatccctagccgtttgattctgccggatacgccgagaaaaggcattgtgattaacctt
gccgagttaaggttgtacttctttgaacctgagaaaaatcaggtgcacgtatttcctgtt
ggcatcggtcgagtggggcgggataccccagagatgatcactaagataagccaaaaaaga
cccaatccgacttggacgcctccaaactcaattcgtaaagagtatctagagaaagggatt
gagctaccaaaagtggttcctgctgggccggaaaaccctctgggcgagtatgcattacga
cttgcttatggtgcaggtgattatctgatacacggtaccaataaagactttgggataggc
ttgcgagtcagctccggctgtattcgtatggaacctaaagatattgagtggctttttgaa
caggttagtcgtggtgagcaagtcacaataatcgatgagcctatcaaagtgtctttagag
ccagataggagcgtgtttgttgaagctcacgaaccattgacgcgaagcgacggctctaag
aaattattgcaaatccccgttgaattaaaatggtggcttgaagatgcggatctaccaagt
tcaaaagcgaaagcggtgatatttgctcaaaatggcgtgcctgttgagatagcaccacct
gtgattgagttctaa
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