Vibrio syngnathi: K08M4_33120
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Entry
K08M4_33120 CDS
T09193
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsy03000
]
K08M4_33120 (gabR)
Transcription factors [BR:
vsy03000
]
Prokaryotic type
Helix-turn-helix
GntR family
K08M4_33120 (gabR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
HTH_11
HTH_24
HTH_Crp_2
Cys_Met_Meta_PP
Rrf2
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
ARP39989
UniProt:
A0AA34TS74
LinkDB
All DBs
Position
2:380253..381710
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AA seq
485 aa
AA seq
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MQPIDVGDLQLDEQHDTRQTALFHAIREKIVHDLWSKGSKLPSTRKLAVELSVSRNTVIY
AYEQLVTEGYIESKQGSGFYVSVEQPEHFLSLSQPHSVQDAQVKRVVSQPSANIVTPNDI
NRSFAPGVPDLDAFPFAKWQRLLQRHSTRQNIAGNQEVQGSLALRDALSGYLASSRSVNC
SADRIIITAGAQQAISIGLMATLVAGDKILVEEPGYRQVHKIIDLLRLELDGVSVREKVG
LDIEKVLSSNAKALYVTPSNQYPMGTTLNTEQRLKLIDWANKHQSWIIEDDYDSEFQFAH
RPYTSMQGLAGKLGFDDRIIYVGSQSKVMFNGLRLGYLVVPENLVAKCLEIKDALTGDTA
SHTQEALADFVREGDLLRHIRKMRRSYKLKYEAMIEAIESEFHGDLEVISQAAGLHVTVK
WYQGISEHEWSRRAELENIIIRPFDFYEYGSSDARDWSGAVLGFGNIRLAEIKPKITQIA
RLFYQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctattgatgtcggtgacctacagttggacgaacaacacgacacgcgtcaaacc
gccttgttccacgcgatcagagagaagatcgttcacgatttatggagcaagggcagtaag
ttaccttcaacacgtaagttggctgtggaattgtcagtaagtcgaaatacggtgatttac
gcgtatgaacaactggttactgaaggctatatcgagagcaagcaaggttcagggttttat
gtgtcggttgaacagccagagcacttcctaagtttgtctcagccacacagtgttcaggat
gcacaggttaagcgtgtagtgagtcaaccgagtgcaaacatagtgacacctaacgacatt
aaccgcagctttgcccctggagtacctgacttagatgcattcccttttgcgaaatggcag
aggctgctgcaacgtcactctacgcgtcagaacattgcgggtaatcaagaggttcaggga
agcttggccttgagggatgcattgagcgggtatcttgcgagtagtcgctcggttaattgt
agtgccgatagaatcatcatcaccgcaggtgcgcagcaagccatctcaatcggattaatg
gcgacgttagtggcgggcgacaaaatccttgtggaagagcccggctatcgacaagtgcat
aaaattatcgatctgttgaggctagagttagatggcgtcagtgtccgtgaaaaggtcggt
cttgatattgaaaaagtgttgtccagtaatgctaaggctctctatgtcaccccgagtaat
caatacccaatgggcacgacgcttaatactgaacaacgcctcaagttgatcgattgggct
aacaaacatcagtcatggattattgaagatgactacgacagtgagttccagtttgctcat
cgcccttataccagcatgcaaggcttagcgggcaaattgggattcgatgaccgaatcatt
tatgtcggttcccagagcaaggtgatgttcaatggccttcgtttaggttacttggtggtg
cctgaaaacttggtggcgaagtgtcttgagattaaagatgcgctcaccggagacacggcg
tcccacacacaggaagcgttggcggattttgttcgcgaaggcgacttgctgcgtcatatt
agaaagatgcgccggtcatacaaactcaagtatgaagccatgatagaagcgattgaaagc
gagtttcatggcgatcttgaagtgatcagtcaggcggcagggctacatgtgaccgtgaag
tggtaccaaggtatatctgaacatgagtggagccgtagagcggaacttgaaaatatcatc
attcgtccttttgacttttatgaatatggatcaagtgatgctcgtgattggagtggggcg
gtgttggggtttggaaatatccgtttggctgagataaagccgaagatcacacagatcgct
cggcttttttatcagtaa
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