Vibrio syngnathi: K08M4_34760
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Entry
K08M4_34760 CDS
T09193
Symbol
apxIB_3
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vsy
Vibrio syngnathi
Pathway
vsy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K08M4_34760 (apxIB_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsy02000
]
K08M4_34760 (apxIB_3)
02044 Secretion system [BR:
vsy02044
]
K08M4_34760 (apxIB_3)
Transporters [BR:
vsy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K08M4_34760 (apxIB_3)
Secretion system [BR:
vsy02044
]
Type I secretion system
Adhesin protein transporter
K08M4_34760 (apxIB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
AAA_21
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
ARP40153
UniProt:
A0AA34TTF6
LinkDB
All DBs
Position
2:568210..569856
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AA seq
548 aa
AA seq
DB search
MPASSMKNKGVVGKVLLPSLLINLLSLAVPLTVLQIYDRILPNQSYGTATLLLAGAALAV
AMEALIRFVRTWLLSAAASNTEKATYQTLVERVTTASSGHLRHIGVGGVEEGLGSVSKVK
DWYSGGVIAGFIDLPFALIFLGLVAYIGGELVAIPLAVWLITLGIVWLSSIRVKSLSEEA
SQDEQERKAFLILLSQTIQGIKRQAVESRIFNQFKSLNNVRSQSKAREEEQNAFAQECIQ
LAALATSVLLVITGSLWVLDGQLTTGGLAACSILSGRAVAPLSALVGVRIKLNSIHSANQ
AIEKLSDLSLSESLDSKQPEIHLSDFETLEIKQATVERYGELAHADVMLKKGELVLLESE
DRHTNSHLLSSIAGIDDLKAGECFINGAAVSIASVTNIAAYCGVKGQLVSGTILDNLCGF
DPERTQGANDYAKRLGLTKEITRLPDGLETQIGHTSASLLSMGNVKMLNIAAQLASDKPI
IMLERPDSSLDLDALGNLAKVLEEEVTAGRTILMVSYHSKLRELANRIITVESRTITVES
EIKQEVVI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaagttcaatgaaaaacaaaggggtggtggggaaagtcctacttccttcttta
cttataaatcttctctctcttgccgttccgttaacggttttacaaatttacgatcgtatt
ttacctaaccaaagttacggtactgccactttgttgttggcgggtgcagcgttggctgtt
gccatggaagcattaatccggtttgtgcgtacttggcttttgtcagccgcggccagcaat
accgagaaagcgacctatcaaaccttggttgaaagagtaacaacggcttcatcaggccat
cttcgccacattggtgttggcggcgtggaagaggggttgggttccgtatcaaaagtcaaa
gactggtattctggtggggtaatagctggctttatcgacttaccttttgcactgatcttc
ttggggttggtggcttacattggcggcgagctggtggcgatacctttggcagtttggctt
attactctcggaatcgtttggttatcttctattcgtgttaaaagcctaagtgaagaagcc
tctcaagatgagcaggagcgaaaagcgttcttgattttgctgagccaaaccattcaggga
atcaaacgtcaggccgttgagtctcgaatcttcaatcagtttaaatccctcaataacgtt
cgttctcagtctaaagcgagagaagaagaacaaaacgcgttcgcacaagagtgtattcaa
ctcgcagcattagcgacgtcagttttactcgtgattacgggtagcttgtgggtattggat
ggtcaattgaccactggtgggttggcagcatgttctatcttatcaggcagagcggttgcg
ccgttaagcgctctggttggcgttcgaatcaagcttaattcaatacacagtgccaatcag
gcaatagaaaagctgagtgacttgtcgttatctgagtctttagattctaagcaacctgag
atccatttatctgactttgagactttggaaatcaaacaagcgaccgttgaaagatatggc
gaactcgctcatgcagatgtgatgctgaagaaaggtgagttggttttgttagagagtgaa
gaccgccataccaacagtcatttattatcttcgattgcaggtattgatgatctgaaagcg
ggcgagtgcttcattaatggcgctgccgtttcaattgcatccgtaaccaacattgctgcc
tactgtggcgtgaaaggacaactggtgtcggggactattctcgacaacttatgtggcttt
gatcccgagagaacacaaggcgccaatgactatgctaagcgtttgggtttaaccaaagag
attactcgattacctgatggactagagacacaaattggccatacgagtgcttctttgttg
agtatgggtaacgtgaaaatgctcaacatcgcggctcaattggcaagtgataaacccata
atcatgttggaaaggccggattcttcacttgatttagacgcccttgggaatctagctaag
gtgttggaagaagaagtgacggcaggacgcactatactgatggtgagctaccattcgaaa
cttcgcgaattagctaatcgaatcattacagtggaaagtcgaaccattacggtcgaaagc
gagatcaagcaggaggtcgtaatatga
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