Vibrio syngnathi: K08M4_34770
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Entry
K08M4_34770 CDS
T09193
Symbol
apxIB_4
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vsy
Vibrio syngnathi
Pathway
vsy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K08M4_34770 (apxIB_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsy02000
]
K08M4_34770 (apxIB_4)
02044 Secretion system [BR:
vsy02044
]
K08M4_34770 (apxIB_4)
Transporters [BR:
vsy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
K08M4_34770 (apxIB_4)
Secretion system [BR:
vsy02044
]
Type I secretion system
Adhesin protein transporter
K08M4_34770 (apxIB_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
AAA_18
RsgA_GTPase
Rad17
AAA_22
AAA_25
AAA_28
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ARP40154
UniProt:
A0AA34TSH5
LinkDB
All DBs
Position
2:569853..572123
Genome browser
AA seq
756 aa
AA seq
DB search
MNRLDTSDRSDTSNRPDTSDRQEVLNHLETESLSVLKQLEVNANIQLFAHQWVDENGIES
IDDMFAMFDRLALPYRLVANLDEVGEHKLVLLVLGEHELVSGHIESKQFIAFDANEDITQ
IPQFCIVIEGPPLEKASPDWVGERLHAFRPIIPKLLLVSFITNLFALAVPFITMSIYDHV
IGGDAGHELQGIAIGAALLFVMMGWLRTLRSRVFASVSNRVSREISQSLVQRLLRNSYAQ
NQQTASSSQQNQVMLSERISGVLSGPLGNALFDLPFILIFVLAIGVLGGWLVLVPVISLI
LYYLLAKRSIRSSSKRSMQSTVAGTNRQNMTNELSSKLAFIRSAGFSEHWIQRFKKANLL
ASTVTFNQSVLQSRYTSIYYFIGVGSTIAVMGLGIGLIFEQVMTPGGLIASMMLISKVTG
PAQVLANSAMRFNSFNQSKLQVNRILSQPSEREFSYQHHPLPVVAPSLKLEQVTLRYPKQ
SRPALNGVSFDIEAGEIVAITGPSGSGKSTLIEVLSGLQPIQNGMVELEGVNLVQYDPQL
YRHWCFIRAAYPDLLTLSIREWLNDGHKVEDQKMISAIEMVGGKRWFETLSGGLDTSISS
IQPDSLFDMLSGSVAQILIDAKALVYEYPMFLMDNPVPDAHPNAKRIFGEFLTSKKGKAT
VIYTSHDPDLIKLADKVVVLNEGAVVYAGPLEPEQSSKQEQPSEPQASQEPQLSEQQLSQ
ELQLSQELQQSTQEASAQQNSAQQEQSESKQGVAND
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtttagatactagtgaccgctcagatacgagcaaccgtccagacacgagtgat
cgacaagaggtactgaaccatttagaaaccgaaagcctttctgttcttaagcagttggaa
gttaacgctaatattcagttgttcgcacatcaatgggtcgatgagaatggcattgaatca
atcgacgatatgtttgccatgttcgacaggcttgcattgccctatcgcttggttgccaac
ctagatgaagttggcgaacacaaactcgtattactggtgcttggtgaacatgagttggtc
tctggtcatatagaatcgaaacagtttattgcttttgatgccaatgaagacattacccag
atcccacagttttgcattgttatcgaaggtccaccactagagaaggcttctcctgattgg
gttggcgaacggctacatgcgtttcgccccattattcctaaattgcttctggtcagtttt
atcactaacttatttgcgcttgccgttcctttcatcacgatgtcgatctatgaccatgtg
attggtggtgatgcagggcatgagctgcaaggtatcgccattggcgcggcgttgttgttt
gtgatgatgggttggttaagaacattgcgtagccgagtgtttgcatcagtttcaaaccga
gtaagtcgtgagatatctcaatctcttgtgcagcgtctacttcgaaatagctatgctcaa
aatcagcaaacagcctcgtctagtcagcaaaaccaagtgatgctgtcagagcgtatttca
ggtgtgctatcggggccattaggaaatgcgctgtttgatctgccattcattcttattttt
gtacttgcgataggtgtattaggcggatggttggtactggttccagtcatctctttaatc
ctatattacttgctagcaaaacgctcgatacgctctagcagcaagcgctcaatgcaatcg
acagtggcaggtacgaatcgtcaaaacatgactaatgagctgtcatccaagcttgccttt
attcgcagtgctggattctcagagcactggattcaacgcttcaaaaaggccaaccttctt
gcgtctacagtgacgttcaatcaatcggttctccagagtcgttacacctcgatttactac
ttcattggtgtggggtctacaatagctgtgatggggctaggcataggacttatttttgaa
caagtgatgacacccggtggtttgattgcttcaatgatgttgatatctaaggtgactggc
cctgctcaggtgttggcaaacagcgcgatgcgttttaatagctttaatcaatccaagctg
caagtgaaccgtattttgtctcagccgtccgagcgagagttcagttaccagcatcacccg
ttgcctgtggtagcgcctagcttgaagttagagcaggtgactctacgttaccctaagcag
agtcgccctgccttgaatggtgtgagttttgatattgaagcgggtgaaattgtcgcgatt
actggcccttctgggagcggtaaatcaacattaattgaagtgctgtctggcttacagcct
atccaaaacggcatggtcgagcttgaaggcgttaacctcgttcaatacgatccgcagctt
tatcgccactggtgtttcattcgagccgcatatcctgatttgcttacgctgagtattcga
gagtggctaaacgacggccataaagttgaagatcagaaaatgatctctgcaattgaaatg
gtgggcggaaagcgttggttcgagacattatcaggcgggctcgatacttccatcagcagt
attcagccggacagcctttttgacatgttgtctggcagcgtcgcgcagatcctcattgac
gcgaaagcgctggtttatgaataccccatgttcttaatggataatcctgtgcctgatgct
cacccaaatgctaaacgtatatttggtgagtttttgacttcgaaaaaaggaaaagcaacg
gtgatctacacgtcccacgacccggatttaatcaagcttgccgataaagtcgtggtatta
aatgaaggtgcagtggtttatgccggtccattagaaccggagcagtcttcgaagcaggaa
cagccttcagagcctcaagcttctcaagaaccgcagttatctgagcaacagttatctcaa
gagttacagctatctcaagagctacagcagtcaactcaagaggcgtctgctcaacaaaat
tcagcccaacaagaacaatcagagtctaagcagggagtcgctaatgactaa
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