Vibrio syngnathi: K08M4_37900
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Entry
K08M4_37900 CDS
T09193
Symbol
glyA__3
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00260
Glycine, serine and threonine metabolism
vsy00460
Cyanoamino acid metabolism
vsy00630
Glyoxylate and dicarboxylate metabolism
vsy00670
One carbon pool by folate
vsy00680
Methane metabolism
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01120
Microbial metabolism in diverse environments
vsy01200
Carbon metabolism
vsy01230
Biosynthesis of amino acids
vsy01240
Biosynthesis of cofactors
vsy04981
Folate transport and metabolism
Module
vsy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K08M4_37900 (glyA__3)
09102 Energy metabolism
00680 Methane metabolism
K08M4_37900 (glyA__3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K08M4_37900 (glyA__3)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K08M4_37900 (glyA__3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K08M4_37900 (glyA__3)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K08M4_37900 (glyA__3)
Enzymes [BR:
vsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K08M4_37900 (glyA__3)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ARP40451
UniProt:
A0AA34TSQ9
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All DBs
Position
2:913255..914547
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AA seq
430 aa
AA seq
DB search
MNAYQNHSLDSFFSTNLSGTDDAVFAGIQAENTRQNEQIELIASENIVSKAVMQAQGTCL
TNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKQLFKCEYVNVQPHSGAQANGAVKLALLQ
PGDTILGMSLDAGGHLTHGARPAMSGKWFNAVQYGVDRDTLEIDYEAVRALAVESQPKMI
IAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHKT
LRGPRGGMILTNHEDINKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFITYIDSVI
DNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNVTEEALERAGITCNKNGIPFD
TEKPMITSGIRLGTPAGTTRGFGTEEFKLIGEWIGDVLDGLVESPEGNAEVEQRVRKQVK
ELCKRFPLYR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttaccaaaaccacagcttagacagttttttctctacgaacctatctggtact
gacgacgccgtatttgctggaatccaagcagagaacactcgtcaaaacgaacaaatcgaa
cttattgcttctgagaacatcgtttctaaagcagtaatgcaagctcaaggcacttgccta
accaacaaatacgcagaaggctacccaggccgtcgctactacggtggttgtgagcacgta
gatacagtagaagctatcgcgattgaacgtgctaaacagctgttcaaatgtgaatacgta
aacgtgcagcctcactctggcgctcaagcaaacggtgcagtaaaacttgccctacttcaa
cctggcgacacaatccttggtatgtctttagatgctggtggtcaccttacacacggtgca
cgtcctgcaatgtcgggcaagtggttcaacgccgttcaatatggcgtagaccgcgacaca
cttgaaatcgattacgaagcagttcgcgctttagctgtcgaaagccaacctaaaatgatt
attgcaggtggtagtgctatcccacgcgttattgatttcgctaaattccgcgaaattgct
gacgaagttggcgctatcctaatggtcgatatggcacacatcgcgggtcttatcgcgaca
ggtgctcaccctagcccactaccacacgcacacgttgttaccacaacgacgcacaaaaca
cttcgtggcccacgcggcggtatgattcttacgaaccacgaagacatcaacaaaaagatc
aactctgcagtgttccctggcctacaaggcggcccactaatgcacgttatcgcggctaaa
gcagtggcgtttggtgaagctcttggccctgaatttattacttatattgattcagtgatc
gacaacgcaaaagttctcgctgaagtgttgcaaactcgcggttgtgacattgtgactggc
ggtacagacacacatctaatgctagttgaccttcgccctaaaggcttgaaaggtaacgta
actgaagaagcattagagcgtgcagggatcacatgtaacaaaaatggcataccattcgat
acagagaagcctatgattacttctggtattcgtttaggtacgccagctgggaccactcgt
ggttttggcactgaagaattcaaacttatcggtgaatggatcggcgatgtacttgatggc
ttagttgaaagccctgaaggcaatgctgaagttgagcaacgtgttcgcaagcaagttaaa
gagctttgcaagcgcttccctctttaccgttaa
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