Vibrio syngnathi: K08M4_37920
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Entry
K08M4_37920 CDS
T09193
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00260
Glycine, serine and threonine metabolism
vsy00630
Glyoxylate and dicarboxylate metabolism
vsy00670
One carbon pool by folate
vsy00785
Lipoic acid metabolism
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01200
Carbon metabolism
Module
vsy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K08M4_37920 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K08M4_37920 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
K08M4_37920 (gcvP)
00670 One carbon pool by folate
K08M4_37920 (gcvP)
Enzymes [BR:
vsy01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
K08M4_37920 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF7572
Motif
Other DBs
NCBI-ProteinID:
ARP40453
UniProt:
A0AA34TTZ5
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All DBs
Position
2:915069..917963
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AA seq
964 aa
AA seq
DB search
MTELLQSQLLKDLGTQNEFVARHNGPNKADQQKMLEAINATSLDALIDETVPAQIRLEKP
MTLAAPLSEMDMLTSLKEIANLNQVKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPY
QPEISQGRLEALLNYQQMVMDLTGMEIANASLLDEATAAGEAMTLCKRAGKSKSKVFFVA
DDVHPQTLEVVKTRAEYIGFEVMVGALETLPEQDVFGALLQYPGTTGEVRDLTDIIAKAQ
ANKTLVTVATDLLASALLKPVGEMGADVAIGSAQRFGVPMGYGGPHAAFMATREKHKRTM
PGRVIGVSIDTHGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGL
RTIARRTHHMTAILAAGLTKSGYELTNNSFFDTITINSEEKTDALYAKAQAADINLRLLQ
DKEGNGKIGISLDETTTIDDVNALFAIFDVKEDVQALSSDIASNEFAAIPENCRRESEFL
THPVFNTHHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIH
PFAPLEQAAGYTALAKDLKEKLCEITGYDDFSLQPNSGASGEYAGLIAIQRYHASRGEAH
RNVCLIPSSAHGTNPATASMVSMKVVVVKCDEDGNIDMTDLAAKIEKHKDNLSSIMITYP
STHGVYEEQVKEVCEQVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPH
GGGGPGMGPIGVKSHLAQFLPGHIENGVQGSDYAVSAADLGSASILPISWAYIAMMGEPG
LTDATKVAILNANYVMEKLRPHYPVLYRGTNGRVAHECIIDIRPLKEDTGISEEDIAKRL
MDFGFHAPTMSFPVAGTLMVEPTESEDLEELDRFCEAMIAIRHEMAAVKAGEWPLDNNPL
VNAPHTQVDLSGAEWDRPYSRELACFPSKATKNSKYWPTVNRVDNVYGDRNLICSCPSID
NYED
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagccaattactgaaagacttgggtacgcaaaacgagtttgtt
gctcgtcataacggccctaataaagcagaccagcaaaaaatgcttgaagcgatcaacgcg
actagcttagacgcactgatcgacgaaacggttcctgcacaaatccgtcttgaaaaacca
atgacacttgctgcgccactgagcgaaatggacatgctgacctctcttaaagagatcgct
aatctaaaccaagtgaaacgtactttcattggccaaggctactacaacacattcactcca
aacgttattctacgtaacgttttagagaacccaggctggtacacagcttacacaccatac
caaccagagatttctcaaggtcgtcttgaagctctactcaattaccaacaaatggtaatg
gaccttacaggtatggaaatcgcgaacgcgtcccttcttgatgaagcgacagcggctggc
gaagcaatgacactgtgtaagcgcgctggcaaaagcaagagcaaagtattcttcgttgct
gacgatgttcaccctcaaacactagaagttgttaaaactcgtgctgagtacatcggcttt
gaagtcatggttggcgctcttgaaacacttccagagcaagatgtatttggtgcgttactt
caatacccaggtacaacaggcgaagttcgtgacctaacagacatcattgcgaaagctcaa
gctaacaagactcttgtaaccgttgcaactgacctacttgcttctgcactacttaagcct
gttggcgaaatgggcgcagacgtagcaattggttcagcgcaacgtttcggcgttcctatg
ggatacggcggtccacacgctgcattcatggcaacacgtgaaaagcataagcgtacaatg
ccaggtcgtgtaatcggtgtttctatcgatactcacggtaaccaagcgctacgtatggca
atgcaaactcgtgagcaacacatccgccgcgagaaagcgacatcgaacatctgtacagct
caagcacttcttgcaaacatggcgtctttctacgcggtttaccacggtgcagaaggccta
cgtactattgcgcgtcgtacacaccacatgacagctatcctagcggctggcctgactaaa
tcaggttacgagctaacaaacaacagcttcttcgataccatcaccatcaactctgaagag
aagaccgatgcactgtacgcgaaagcgcaagcagcagacatcaaccttcgcttacttcaa
gataaagaaggtaatggcaaaatcggtatcagcttagatgaaacaacaacgatcgacgac
gtgaacgcattgttcgctatcttcgacgtgaaagaagacgttcaagcactatcttctgac
attgcatcaaacgaatttgcagcaattccagaaaactgccgtcgtgaatctgaattccta
actcacccagtattcaacacgcaccacagcgaaacgcaaatgatgcgttacctaaaacag
cttgagaacaaagacttctcactaacgcacggcatgatcccactgggcagctgtacgatg
aagctgaacgcggctgctgagatgattcctgtaacatggcctgagtttggttcaattcac
ccattcgcacctctagagcaagcggctggctacacagcgctagcgaaagatcttaaagag
aagctatgtgaaatcaccggttacgacgatttctcactacagcctaactctggtgcatct
ggtgaatacgcgggtctaatcgctattcaacgctaccacgcaagccgcggtgaagctcac
cgtaacgtttgtttgattccaagctctgcgcacggtactaaccctgcaacagcatcaatg
gtttcaatgaaggtggtggttgttaagtgtgatgaagatggcaacatcgacatgaccgac
ttagcagcgaaaatcgagaagcacaaagacaacctatcaagcatcatgatcacttaccct
tctacgcacggcgtatacgaagagcaagtgaaagaagtgtgtgaacaagtacacgcagct
ggcggtcaggtttacctagacggcgcgaacatgaacgctcaagttggtctaacttcacct
ggttttatcggttcagacgtatctcacttgaacctacacaaaacattctgtattccacac
ggtggtggcggtccgggtatgggtcctatcggtgttaaatcgcacctagcacaattccta
ccaggtcacatcgaaaacggtgtacaaggctctgactacgcggtatcagcagcagattta
ggtagtgcttcaatcctacctatctcttgggcttacattgcgatgatgggcgaacctggc
ctaacagacgcaacgaaagtagcgattctgaacgcgaactacgtgatggagaaactacgt
cctcactaccctgttctttaccgtggcactaacggccgcgtagcgcacgaatgtattatc
gatattcgtccgcttaaagaagacacaggcatcagcgaagaagatattgctaaacgtcta
atggacttcggtttccacgcgcctactatgtctttcccagtagctggcacactaatggta
gagccaactgaatctgaagacttagaagagcttgaccgtttctgtgaagcaatgatagca
atccgtcatgaaatggcagctgtgaaggccggtgaatggccactagacaacaaccctcta
gtgaacgcaccacacacacaagttgacctttcaggcgcagaatgggatcgcccttactct
cgcgaactggcttgcttcccatcgaaagcaaccaagaactcgaagtactggccaacagtt
aaccgtgtagacaacgtatacggcgaccgtaacctaatctgttcttgcccaagcatcgat
aactacgaagattaa
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