Vibrio syngnathi: K08M4_38830
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Entry
K08M4_38830 CDS
T09193
Symbol
rbsB
Name
(GenBank) D-ribose-binding periplasmic protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
vsy
Vibrio syngnathi
Pathway
vsy02010
ABC transporters
vsy02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K08M4_38830 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K08M4_38830 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsy02000
]
K08M4_38830 (rbsB)
Transporters [BR:
vsy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K08M4_38830 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
PucR
ANF_receptor
FAD_binding_4
Porin_7
Motif
Other DBs
NCBI-ProteinID:
ARP40544
UniProt:
A0AA34TT48
LinkDB
All DBs
Position
2:1044187..1045065
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AA seq
292 aa
AA seq
DB search
MKKLATLISAALLSTTVSVSAQAQDTMAIVLSTLNNPFFVTMKDGAEAKAEELGYKLIVL
DSQNDPSKELSNIEDLTIRGVKAILINPTDSDAVSNAIRIANRSNIPVLTLDRGASRGDV
VSHIASDNVIGGEMAGHYIMEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVNGSDLELL
ASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAVQASGKEVMIVGFDGTE
DGIAAVNRGLLGATVAQQPDLIGSLGIEIADKVLKGETVDEYVPVALKIIAK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattagcgactcttatttctgctgctcttctttctacaacagtatctgtgtct
gcacaggcgcaagatacaatggcaatcgttctatctacattgaataacccattctttgta
accatgaaagatggcgcagaagcgaaagctgaagagctaggctacaagcttatcgttctt
gattctcaaaacgacccaagcaaagagctttcgaacattgaagatctaaccattcgtggt
gtgaaagcaatcctgattaacccaacggattcagacgctgtgtctaacgcgattcgcatt
gctaaccgttcaaacatccctgtactgacactagaccgtggtgcaagccgtggtgacgta
gtgagccacattgcttctgataacgtaattggcggtgaaatggcaggtcactacatcatg
gaaaaagtgggcgagaaagcgaaagtaatccaacttgaaggtatcgcgggtacatcggct
gctcgtgaacgtggcgaaggcttcatgaacgcagtaaacggcagcgaccttgagcttctt
gcaagccaacctgctgatttcgaccgtactaaaggtctgaacgtaatggaaaacttgctt
gctgctaacccagatgtacaagcggtattcgctcaaaacgatgaaatggcactaggtgct
cttcgcgccgttcaagcttcaggtaaagaagtgatgatcgttggctttgatggcactgaa
gacggtatcgctgctgttaaccgcggcctactaggcgcaacggttgcacaacagcctgac
ctaatcggttctttaggtattgaaatagcagacaaagtactgaaaggcgagacagtagac
gagtacgtaccagtagctctaaaaatcatcgctaagtaa
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